RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CFHR2P36980 270 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 RAG2P55895 527 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 EMX1Q04741 257 aaPredicted RBP13.76□□□□□ -0.21
NEK9-211ENST00000557673 LIPKQ5VXJ0 399 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 SFRP4Q6FHJ7 346 aaPredicted RBP13.76□□□□□ -0.21
NEK9-211ENST00000557673 ZNF529Q6P280 563 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 HAGHLQ6PII5 290 aaPredicted RBP13.76□□□□□ -0.21
NEK9-211ENST00000557673 ZNF573Q86YE8 665 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 SERPINA12Q8IW75 414 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 TMEM86BQ8N661 226 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 DNAAF1Q8NEP3 725 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 OR10Z1Q8NGY1 313 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 LRRC29Q8WV35 223 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 AQP3Q92482 292 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 OR14A2Q96R54 314 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 MGLLQ99685 303 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 NUDT16L1Q9BRJ7 211 aaKnown RBP13.76□□□□□ -0.21
NEK9-211ENST00000557673 MMP27Q9H306 513 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 ZCCHC4Q9H5U6 513 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 TAS2R4Q9NYW5 299 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 CLN8Q9UBY8 286 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 NOTCH1P46531 2555 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 IGKV1-27A0A075B6S5 117 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 TRBV5-7A0A0A0MS05 114 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 FAM230AA0A1W2PPH8 454 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.75□□□□□ -0.21
NEK9-211ENST00000557673 LGALS8O00214 317 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 SULT1B1O43704 296 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 NDUFA7O95182 113 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 TNFAIP8O95379 198 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 CPEP16870 476 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 FSTP19883 344 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 PRKACBP22694 351 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 MPZP25189 248 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 HAAOP46952 286 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 FUT6P51993 359 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 RPL15P61313 204 aaKnown RBP13.75□□□□□ -0.21
NEK9-211ENST00000557673 GPR50Q13585 617 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 TPBGQ13641 420 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 PDCD1Q15116 288 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 DEFB112Q30KQ8 113 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 UBE2UQ5VVX9 321 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 OLFML2AQ68BL7 652 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 BRICD5Q6PL45 260 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 KIR3DL3Q8N743 410 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 TAF15Q92804 592 aaKnown RBP eCLIP13.75□□□□□ -0.21
NEK9-211ENST00000557673 DACT3Q96B18 629 aaPredicted RBP13.75□□□□□ -0.21
NEK9-211ENST00000557673 BORCS8Q96FH0 119 aa13.75□□□□□ -0.21
NEK9-211ENST00000557673 ZNF879B4DU55 563 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 RHBDL1O75783 438 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 ALX3O95076 343 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 LHBP01229 141 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 WDR25Q64LD2 544 aaPredicted RBP13.74□□□□□ -0.21
NEK9-211ENST00000557673 FIP1L1Q6UN15 594 aaKnown RBP13.74□□□□□ -0.21
NEK9-211ENST00000557673 BRD3OSQ6XYD6 125 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 Q6YL49 198 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 LHFPL2Q6ZUX7 228 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 CALHM1Q8IU99 346 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 OR51A2Q8NGJ7 313 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 OR5D14Q8NGL3 314 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 FCGR1BQ92637 280 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 THRSPQ92748 146 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 DERL3Q96Q80 235 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 CITED1Q99966 193 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 TMED9Q9BVK6 235 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 PKIBQ9C010 78 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 CTSZQ9UBR2 303 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 SOX21Q9Y651 276 aaPredicted RBP13.74□□□□□ -0.21
NEK9-211ENST00000557673 POMT1Q9Y6A1 747 aa13.74□□□□□ -0.21
NEK9-211ENST00000557673 IGHV3OR15-7A0A075B7D8 119 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 MDFIC2A0A1B0GVS7 189 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 CLPSL1A2RUU4 121 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 OOEPA6NGQ2 149 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 SYNGR1O43759 233 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 ENSAO43768 121 aaKnown RBP13.73□□□□□ -0.21
NEK9-211ENST00000557673 SC5DO75845 299 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 RAB3AP20336 220 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 MAPK3P27361 379 aaPredicted RBP13.73□□□□□ -0.21
NEK9-211ENST00000557673 RBP2P50120 134 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 NPY4RP50391 375 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 FGF12P61328 243 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 RPS25P62851 125 aaKnown RBP13.73□□□□□ -0.21
NEK9-211ENST00000557673 SSX1Q16384 188 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 CD276Q5ZPR3 534 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 CRIP3Q6Q6R5 217 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 ZNF841Q6ZN19 808 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 MS4A15Q8N5U1 240 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 ORAI1Q96D31 301 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 POLDIP2Q9Y2S7 368 aa13.73□□□□□ -0.21
NEK9-211ENST00000557673 TRAV38-1A0A0B4J264 116 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 C22orf46C9J442 243 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 AKR7A2O43488 359 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 ADAM20O43506 726 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 GYPAP02724 150 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 LIPFP07098 398 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 HCKP08631 526 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 OCMP0CE72 109 aaPredicted RBP13.72□□□□□ -0.21
NEK9-211ENST00000557673 PGA5P0DJD9 388 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 IGFBP3P17936 291 aaPredicted RBP13.72□□□□□ -0.21
NEK9-211ENST00000557673 ATP1B3P54709 279 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms