RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ZNF396Q96N95 335 aaPredicted RBP3.54□□□□□ -1.84
MTHFD1-216ENST00000557539 SCGB3A2Q96PL1 93 aa3.54□□□□□ -1.84
MTHFD1-216ENST00000557539 ACBD6Q9BR61 282 aa3.54□□□□□ -1.84
MTHFD1-216ENST00000557539 UTP23Q9BRU9 249 aaKnown RBP3.54□□□□□ -1.84
MTHFD1-216ENST00000557539 TCEAL2Q9H3H9 227 aaPredicted RBP3.54□□□□□ -1.84
MTHFD1-216ENST00000557539 VCX3AQ9NNX9 186 aa3.54□□□□□ -1.84
MTHFD1-216ENST00000557539 FBXO8Q9NRD0 319 aa3.54□□□□□ -1.84
MTHFD1-216ENST00000557539 ZNF835Q9Y2P0 537 aa3.54□□□□□ -1.84
MTHFD1-216ENST00000557539 NOSIPQ9Y314 301 aaKnown RBP3.54□□□□□ -1.84
MTHFD1-216ENST00000557539 YLPM1P49750 1951 aaKnown RBP3.54□□□□□ -1.84
MTHFD1-216ENST00000557539 MYH9P35579 1960 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 MYH10P35580 1976 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 IGKV6-21A0A0C4DH24 114 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 SPTY2D1-AS1A0A0U1RR47 76 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 E7EWF7 191 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 H3BNH8 94 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 CYTH3O43739 400 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 SC5DO75845 299 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 TACSTD2P09758 323 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 CNR1P21554 472 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 MAS1LP35410 378 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 PAFAH1B2P68402 229 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 UNC119Q13432 240 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 TFDP2Q14188 446 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 CST6Q15828 149 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 C15orf32Q32M92 178 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 GFI1BQ5VTD9 330 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 ANKRD22Q5VYY1 191 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 CCDC54Q8NEL0 328 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 OR52E2Q8NGJ4 325 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 OR6N2Q8NGY6 317 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 CCDC12Q8WUD4 166 aaPredicted RBP3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 ZNF317Q96PQ6 595 aaPredicted RBP3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 UQCC2Q9BRT2 126 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 SPZ1Q9BXG8 430 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 OR11A1Q9GZK7 315 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 CHRNA10Q9GZZ6 450 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 GOLPH3Q9H4A6 298 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 SLCO1B3Q9NPD5 702 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 CLEC4EQ9ULY5 219 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 POFUT2Q9Y2G5 429 aa3.53□□□□□ -1.84
MTHFD1-216ENST00000557539 DNAH3Q8TD57 4116 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 A0A0G2JN53 185 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 KMOO15229 486 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 SLC31A2O15432 143 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 B4GALT5O43286 388 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 ERI3O43414 337 aaKnown RBP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 RDH16O75452 317 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 HPRT1P00492 218 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 EIF4EP06730 217 aaKnown RBP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 RHOCP08134 193 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 HOXC4P09017 264 aaPredicted RBP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 P0C879 139 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 OR5H8P0DN80 308 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 NQO2P16083 231 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 BGNP21810 368 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 USF1P22415 310 aaPredicted RBP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 F2RP25116 425 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 ANP32AP39687 249 aaKnown RBP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 KCNJ3P48549 501 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 NCBP2P52298 156 aaKnown RBP eCLIP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 MAP3K7CLP57077 242 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 SLC35B1P78383 322 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 LRRC63Q05C16 580 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 PRPSAP1Q14558 356 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 ZNF266Q14584 549 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 PSG3Q16557 428 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 SGCAQ16586 387 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 KPRPQ5T749 579 aaPredicted RBP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 RWDD4Q6NW29 188 aaKnown RBP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 WDR82Q6UXN9 313 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 NPSR1Q6W5P4 371 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 RNF165Q6ZSG1 346 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 SPATA24Q86W54 205 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 DOLPP1Q86YN1 238 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 FAM71AQ8IYT1 594 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 SELENOHQ8IZQ5 122 aaKnown RBP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 FAM9CQ8IZT9 166 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 CEND1Q8N111 149 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 CBR4Q8N4T8 237 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 WDR31Q8NA23 367 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 OR5AR1Q8NGP9 310 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 OR6K6Q8NGW6 343 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 ANGPTL6Q8NI99 470 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 NEIL3Q8TAT5 605 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 LRRC29Q8WV35 223 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 CDKL2Q92772 493 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 MRGPRFQ96AM1 343 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 TRNT1Q96Q11 434 aaKnown RBP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 ATOH8Q96SQ7 321 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 RASL11BQ9BPW5 248 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 GFRA4Q9GZZ7 299 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 ZNF629Q9UEG4 869 aaPredicted RBP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 GLS2Q9UI32 602 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 C15orf41Q9Y2V0 281 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 HEBP2Q9Y5Z4 205 aa3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 PLECQ15149 4684 aaKnown RBP3.52□□□□□ -1.85
MTHFD1-216ENST00000557539 HUWE1Q7Z6Z7 4374 aaKnown RBP3.51□□□□□ -1.85
MTHFD1-216ENST00000557539 KLF18A0A0U1RQI7 1052 aa3.51□□□□□ -1.85
MTHFD1-216ENST00000557539 A0A1B0GUA9 196 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms