RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 SLC25A4P12235 298 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 C4BPBP20851 252 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 TCF15Q12870 199 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 PPA1Q15181 289 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 TOR2AQ5JU69 321 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 SPATA46Q5T0L3 261 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 TMEM17Q86X19 198 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 GCNT2Q8N0V5 402 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 COQ8AQ8NI60 647 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 APOBEC3DQ96AK3 386 aaPredicted RBP8.71□□□□□ -1.02
TMEM260-211ENST00000556648 C1QTNF6Q9BXI9 259 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 ANXA10Q9UJ72 324 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 CACNA1HO95180 2353 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 RRP8O43159 456 aaKnown RBP8.7□□□□□ -1.02
TMEM260-211ENST00000556648 ARR3P36575 388 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 ARL6IP1Q15041 203 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 TSC22D1Q15714 1073 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 FBXW9Q5XUX1 488 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 SLC22A25Q6T423 547 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 VRK1Q99986 396 aaPredicted RBP8.7□□□□□ -1.02
TMEM260-211ENST00000556648 GSX2Q9BZM3 304 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 COMMD9Q9P000 198 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 MED12LQ86YW9 2145 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 DOCK7Q96N67 2140 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 ZNF732B4DXR9 585 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 SYNGR1O43759 233 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 PDCD6O75340 191 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 CRHP06850 196 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 NMBP08949 121 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 OR5H8P0DN80 308 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 DTYMKP23919 212 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 HAAOP46952 286 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 P2RX3P56373 397 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 FGL1Q08830 312 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 MALLQ13021 153 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 DEFB109BQ30KR1 87 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 RTL6Q6ICC9 239 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 TMEM65Q6PI78 240 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 P4HA3Q7Z4N8 544 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 ZDHHC23Q8IYP9 409 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 KCNRGQ8N5I3 272 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 PRSS33Q8NF86 280 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 OR6K3Q8NGY3 331 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 ZNF488Q96MN9 340 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 ZNF75AQ96N20 296 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 TECTBQ96PL2 329 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 CLCF1Q9UBD9 225 aa8.7□□□□□ -1.02
TMEM260-211ENST00000556648 CD300LBA8K4G0 201 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 H0YIZ8 118 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 OR7C1O76099 320 aaPredicted RBP8.69□□□□□ -1.02
TMEM260-211ENST00000556648 CST4P01036 141 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 ZNF250P15622 560 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 APLNRP35414 380 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 RAB14P61106 215 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 PLP2Q04941 152 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 AANATQ16613 207 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 CEACAM21Q3KPI0 293 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 TFAP2EQ6VUC0 442 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 RELL2Q8NC24 303 aaPredicted RBP8.69□□□□□ -1.02
TMEM260-211ENST00000556648 OR5M9Q8NGP3 310 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 OR10C1Q96KK4 312 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 TRIB1Q96RU8 372 aa8.69□□□□□ -1.02
TMEM260-211ENST00000556648 HSPB6O14558 160 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 LYZL6O75951 148 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 HOXB5P09067 269 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 RRASP10301 218 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 IGHV1-2P23083 117 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 DUSP1P28562 367 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 FXYD4P59646 89 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 ERVS71-1P61550 626 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 FAM74A1Q5RGS3 127 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 THOC7Q6I9Y2 204 aaKnown RBP8.68□□□□□ -1.02
TMEM260-211ENST00000556648 SLC30A7Q8NEW0 376 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 SCARB1Q8WTV0 552 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 ST8SIA2Q92186 375 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 TOMM40LQ969M1 308 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 CCDC120Q96HB5 630 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 SCGB3A2Q96PL1 93 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 RNF126Q9BV68 326 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 REG4Q9BYZ8 158 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 CHMP1AQ9HD42 196 aaPredicted RBP8.68□□□□□ -1.02
TMEM260-211ENST00000556648 PLSCR2Q9NRY7 297 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 MTCH1Q9NZJ7 389 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 KIF25Q9UIL4 384 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 C14orf166Q9Y224 244 aaKnown RBP8.68□□□□□ -1.02
TMEM260-211ENST00000556648 ZNF175Q9Y473 711 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 I3L521 148 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 BCL2L11O43521 198 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 IGHG3P01860 377 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 LUMP51884 338 aaPredicted RBP8.68□□□□□ -1.02
TMEM260-211ENST00000556648 SURF2Q15527 256 aaPredicted RBP8.68□□□□□ -1.02
TMEM260-211ENST00000556648 OR2T2Q6IF00 324 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 SLC51BQ86UW2 128 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 POC1AQ8NBT0 407 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 THAP6Q8TBB0 222 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 DCUN1D4Q92564 292 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 EXTL1Q92935 676 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 MRPS24Q96EL2 167 aaKnown RBP8.68□□□□□ -1.02
TMEM260-211ENST00000556648 RRNAD1Q96FB5 475 aaKnown RBP8.68□□□□□ -1.02
TMEM260-211ENST00000556648 GMPPAQ96IJ6 420 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms