RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 COPS8Q99627 209 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 EBNA1BP2Q99848 306 aaKnown RBP3.24□□□□□ -1.89
PRPF39-209ENST00000556353 HES7Q9BYE0 225 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 ROGDIQ9GZN7 287 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 SRMSQ9H3Y6 488 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 SLC25A19Q9HC21 320 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 LYRM4Q9HD34 91 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 OR2S2Q9NQN1 319 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 YAE1D1Q9NRH1 226 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 NLE1Q9NVX2 485 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-209ENST00000556353 COA4Q9NYJ1 87 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 TECRQ9NZ01 308 aaKnown RBP3.24□□□□□ -1.89
PRPF39-209ENST00000556353 ZNF639Q9UID6 485 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 PSORS1C1Q9UIG5 152 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 FOXA2Q9Y261 457 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-209ENST00000556353 ASB4Q9Y574 426 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 RTTNQ86VV8 2226 aa3.24□□□□□ -1.89
PRPF39-209ENST00000556353 CADP27708 2225 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 IGKV1-8A0A0C4DH67 115 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 A0A0J9YY10 115 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 A0A1B0GW15 77 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 A0A1W2PPV9 198 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 PINLYPA6NC86 204 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 E7EQ34 232 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 H0YIG0 161 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 CFLARO15519 480 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 PRKYO43930 277 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 SHOX2O60902 331 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-209ENST00000556353 NME6O75414 186 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-209ENST00000556353 OR2B3O76000 313 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 AP2A1O95782 977 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 RPN2P04844 631 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 S100A8P05109 93 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 IGFBP5P24593 272 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 DCKP27707 260 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 ERP29P30040 261 aaKnown RBP3.23□□□□□ -1.89
PRPF39-209ENST00000556353 CCR7P32248 378 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 MPIP34949 423 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 RCVRNP35243 200 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 GPX4P36969 197 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-209ENST00000556353 BDKRB1P46663 353 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 IDH2P48735 452 aaKnown RBP3.23□□□□□ -1.89
PRPF39-209ENST00000556353 RGS6P49758 472 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 TDGF1P3P51864 188 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 GEMP55040 296 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 TMEM33P57088 247 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 SEC61GP60059 68 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 ESRRGP62508 458 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 ELF3P78545 371 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-209ENST00000556353 CRADDP78560 199 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 CCZ1BP86790 482 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 CCZ1P86791 482 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-209ENST00000556353 ACVR1Q04771 509 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 TFDP2Q14188 446 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 DUSP7Q16829 419 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 COX19Q49B96 90 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 LGSNQ5TDP6 509 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 SLC22A10Q63ZE4 541 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 NIPAL1Q6NVV3 410 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 BTNL3Q6UXE8 466 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 ZNF562Q6V9R5 426 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 B3GLCTQ6Y288 498 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 Q6ZS92 163 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 RNF175Q8N4F7 328 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 C2orf73Q8N5S3 287 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-209ENST00000556353 OR4D6Q8NGJ1 314 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 OR5D13Q8NGL4 314 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 OR2Y1Q8NGV0 311 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 M1APQ8TC57 530 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 MARCH1Q8TCQ1 289 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 PYROXD1Q8WU10 500 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 FCGR1BQ92637 280 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 TFGQ92734 400 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-209ENST00000556353 GGHQ92820 318 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 OSTF1Q92882 214 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 HGDQ93099 445 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 PRAP1Q96NZ9 151 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 VAT1Q99536 393 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 KLHDC3Q9BQ90 382 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 TCEAL7Q9BRU2 100 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 UTP23Q9BRU9 249 aaKnown RBP3.23□□□□□ -1.89
PRPF39-209ENST00000556353 TMEM121Q9BTD3 319 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 TSSK1BQ9BXA7 367 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 ROPN1BQ9BZX4 212 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-209ENST00000556353 CCDC90BQ9GZT6 254 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 CHRNA10Q9GZZ6 450 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 SDHAF2Q9NX18 166 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 DPM3Q9P2X0 92 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 FLVCR2Q9UPI3 526 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 PIGLQ9Y2B2 252 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 URGCP-MRPS24S4R325 110 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 NACAE9PAV3 2078 aa3.23□□□□□ -1.89
PRPF39-209ENST00000556353 FREM1Q5H8C1 2179 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 PKD1L1Q8TDX9 2849 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 FAM231BA6NCW3 169 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 SAGE2PA6NJ88 616 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 VSTM2BA6NLU5 285 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 BTNL10A8MVZ5 291 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 LOC110117498-PIK3R3F6TDL0 507 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 H3BN98 237 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms