RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 SNX22Q96L94 193 aa10.29□□□□□ -0.76
SNX6-207ENST00000556303 ZNF488Q96MN9 340 aa10.29□□□□□ -0.76
SNX6-207ENST00000556303 MBOAT4Q96T53 435 aa10.29□□□□□ -0.76
SNX6-207ENST00000556303 ELL3Q9HB65 397 aaPredicted RBP10.29□□□□□ -0.76
SNX6-207ENST00000556303 RHOFQ9HBH0 211 aa10.29□□□□□ -0.76
SNX6-207ENST00000556303 NEK6Q9HC98 313 aa10.29□□□□□ -0.76
SNX6-207ENST00000556303 RAB18Q9NP72 206 aa10.29□□□□□ -0.76
SNX6-207ENST00000556303 INPP5EQ9NRR6 644 aa10.29□□□□□ -0.76
SNX6-207ENST00000556303 MTCH1Q9NZJ7 389 aa10.29□□□□□ -0.76
SNX6-207ENST00000556303 NOTCH1P46531 2555 aa10.29□□□□□ -0.76
SNX6-207ENST00000556303 C17orf98A8MV24 154 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 TIMM23O14925 209 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 ALX3O95076 343 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 MT-ND2P03891 347 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 HTR1AP08908 422 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 KIR3DL2P43630 455 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 MEF2CQ06413 473 aaPredicted RBP10.28□□□□□ -0.76
SNX6-207ENST00000556303 GALEQ14376 348 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 ZNF146Q15072 292 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 TP53I3Q53FA7 332 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 TREML4Q6UXN2 200 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 LIAT1Q6ZQX7 453 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 LHFPL2Q6ZUX7 228 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 SYS1Q8N2H4 156 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 CBR4Q8N4T8 237 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 TRMT10AQ8TBZ6 339 aaKnown RBP10.28□□□□□ -0.76
SNX6-207ENST00000556303 TAF15Q92804 592 aaKnown RBP eCLIP10.28□□□□□ -0.764e-6■■□□□ 11.5
SNX6-207ENST00000556303 UBE2FQ969M7 185 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 FRRS1LQ9P0K9 344 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 OR14J1Q9UGF5 321 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 GLS2Q9UI32 602 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 HHLA2Q9UM44 414 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 GMPPBQ9Y5P6 360 aa10.28□□□□□ -0.76
SNX6-207ENST00000556303 IGKV1-27A0A075B6S5 117 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 TRBV2A0A0J9YWF9 115 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 EBAG9O00559 213 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 ANGPTL7O43827 346 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 ZNF737O75373 536 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 FADS2O95864 444 aaKnown RBP10.27□□□□□ -0.77
SNX6-207ENST00000556303 ZNF20P17024 532 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 GABRB1P18505 474 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 ATF1P18846 271 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 MTCP1P56278 107 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 LGALS4P56470 323 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 OR12D2P58182 307 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 PROK1P58294 105 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 COL10A1Q03692 680 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 SPIN3Q5JUX0 258 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 C11orf88Q6PI97 169 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 BRICD5Q6PL45 260 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 Q6ZSV7 163 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 SLC25A26Q70HW3 274 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 RDH10Q8IZV5 341 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 OR8H2Q8N162 312 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 ASCC1Q8N9N2 400 aaKnown RBP10.27□□□□□ -0.77
SNX6-207ENST00000556303 OR13D1Q8NGV5 346 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 RHOXF1Q8NHV9 184 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 PPP1R35Q8TAP8 253 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 CDCA4Q9BXL8 241 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 S100A14Q9HCY8 104 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 MRPS18AQ9NVS2 196 aaKnown RBP10.27□□□□□ -0.77
SNX6-207ENST00000556303 FBLN5Q9UBX5 448 aa10.27□□□□□ -0.77
SNX6-207ENST00000556303 TBL2Q9Y4P3 447 aaKnown RBP10.27□□□□□ -0.77
SNX6-207ENST00000556303 DSCAML1Q8TD84 2053 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 IGKV1-9A0A0C4DH69 117 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 A0A1W2PRD5 423 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 A0A1W2PRF3 423 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 A0A1W2PRM7 423 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 hADV38S2A0JD32 116 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 FAM90A8PA6NJQ4 464 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 VGLL3A8MV65 326 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 M0QZ24 198 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 ZNF728P0DKX0 622 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 PEX2P28328 305 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 ERP29P30040 261 aaKnown RBP10.26□□□□□ -0.77
SNX6-207ENST00000556303 DLX1P56177 255 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 RAB40BQ12829 278 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 ALKBH1Q13686 389 aaKnown RBP10.26□□□□□ -0.77
SNX6-207ENST00000556303 LRRC75BQ2VPJ9 315 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 ZIK1Q3SY52 487 aaPredicted RBP10.26□□□□□ -0.77
SNX6-207ENST00000556303 ZBTB49Q6ZSB9 765 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 GDPD3Q7L5L3 318 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 OR4M1Q8NGD0 313 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 SLAMF9Q96A28 289 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 FGGYQ96C11 551 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 LGALS12Q96DT0 336 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 ADAT3Q96EY9 351 aaPredicted RBP10.26□□□□□ -0.77
SNX6-207ENST00000556303 AJUBAQ96IF1 538 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 RDH12Q96NR8 316 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 SSX3Q99909 188 aa10.26□□□□□ -0.77
SNX6-207ENST00000556303 RPL36Q9Y3U8 105 aaKnown RBP10.26□□□□□ -0.77
SNX6-207ENST00000556303 LOC100130705A0A1B0GUX0 176 aa10.25□□□□□ -0.77
SNX6-207ENST00000556303 FUOMA2VDF0 154 aa10.25□□□□□ -0.77
SNX6-207ENST00000556303 TMEM212A6NML5 194 aa10.25□□□□□ -0.77
SNX6-207ENST00000556303 OR4C45A6NMZ5 311 aa10.25□□□□□ -0.77
SNX6-207ENST00000556303 J3QLW9 94 aa10.25□□□□□ -0.77
SNX6-207ENST00000556303 HAND1O96004 215 aa10.25□□□□□ -0.77
SNX6-207ENST00000556303 IGHA1P01876 353 aa10.25□□□□□ -0.77
SNX6-207ENST00000556303 OCM2P0CE71 109 aa10.25□□□□□ -0.77
SNX6-207ENST00000556303 OCMP0CE72 109 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms