RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 HILPDAQ9Y5L2 63 aa5.4□□□□□ -1.54
ATXN3-236ENST00000556220 IGKV1D-17A0A075B6S4 117 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 IGLV1-36A0A0B4J1U3 117 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 CCL24O00175 119 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 DCTN6O00399 190 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 CDC42EP2O14613 210 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 AKR7A2O43488 359 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 PTP4A3O75365 173 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 APOL3O95236 402 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 SNRNP70P08621 437 aaKnown RBP5.39□□□□□ -1.55
ATXN3-236ENST00000556220 PGA5P0DJD9 388 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 SMIM18P0DKX4 95 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 PSG2P11465 335 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 CRABP1P29762 137 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 OTX1P32242 354 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-236ENST00000556220 GNALP38405 381 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 CDKN2AP42771 156 aaKnown RBP5.39□□□□□ -1.55
ATXN3-236ENST00000556220 YAP1P46937 504 aaKnown RBP5.39□□□□□ -1.55
ATXN3-236ENST00000556220 RAB25P57735 213 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 SLC36A3Q495N2 470 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 ZBED5Q49AG3 693 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 FAM76BQ5HYJ3 339 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 MINOS1Q5TGZ0 78 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 ZNF626Q68DY1 528 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 GPR139Q6DWJ6 353 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 DNM1P34Q6PK57 102 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 DRAM2Q6UX65 266 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 IZUMO2Q6UXV1 221 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 LHFPL2Q6ZUX7 228 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 ARPINQ7Z6K5 226 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 ADCK1Q86TW2 530 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 ZNF329Q86UD4 541 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 CALHM1Q8IU99 346 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 OR6V1Q8N148 313 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 OR11H6Q8NGC7 330 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 OR5M8Q8NGP6 311 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 OR13D1Q8NGV5 346 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 OR2AJ1Q8NGZ0 328 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 CAPSLQ8WWF8 208 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 RPL3LQ92901 407 aaKnown RBP5.39□□□□□ -1.55
ATXN3-236ENST00000556220 SPSB4Q96A44 273 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 SDSLQ96GA7 329 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 RAX2Q96IS3 184 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 NSMCE2Q96MF7 247 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 CIB1Q99828 191 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 MICU1Q9BPX6 476 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 MLST8Q9BVC4 326 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 PPP1R3EQ9H7J1 279 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 NRIP3Q9NQ35 241 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 ZNF222Q9UK12 451 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 BAG5Q9UL15 447 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 AP4S1Q9Y587 144 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 MINOS1-NBL1R4GNA1 71 aa5.39□□□□□ -1.55
ATXN3-236ENST00000556220 TRBV4-1A0A0J9YWV2 114 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 SH2D7A6NKC9 451 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-236ENST00000556220 C17orf98A8MV24 154 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 SEC14L6B5MCN3 397 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 EI24O14681 340 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 CIB2O75838 187 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 LY86O95711 162 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 BAG2O95816 211 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 TXNDC12O95881 172 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 SCGB1D2O95969 90 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 AMY1AP04745 511 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 FRMD6-AS1P0C7T7 363 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 CCL3L1P16619 93 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 GLRA1P23415 457 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 IFNA8P32881 189 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 DAPP51397 102 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 CAPZA1P52907 286 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 FXYD6P3P58550 94 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 ADARB1P78563 741 aaKnown RBP5.38□□□□□ -1.55
ATXN3-236ENST00000556220 FAM3AP98173 230 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 ZNF273Q14593 569 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 LRRC23Q53EV4 343 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-236ENST00000556220 PLBD1Q6P4A8 553 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 EGFL6Q8IUX8 553 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 ZNF695Q8IW36 515 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 RNF113BQ8IZP6 322 aaKnown RBP5.38□□□□□ -1.55
ATXN3-236ENST00000556220 CBR4Q8N4T8 237 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 KLHL30-AS1Q8NEE0 82 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 OR4M1Q8NGD0 313 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 OR2T27Q8NH04 317 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 PYURFQ96I23 114 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 RBM14Q96PK6 669 aaKnown RBP5.38□□□□□ -1.55
ATXN3-236ENST00000556220 DUX3Q96PT4 197 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 GPX7Q96SL4 187 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-236ENST00000556220 TM2D3Q9BRN9 247 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 NDEL1Q9GZM8 345 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 YY1AP1Q9H869 796 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 SP140LQ9H930 580 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 NDE1Q9NXR1 346 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 RHCGQ9UBD6 479 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 IER3IP1Q9Y5U9 82 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 LYVE1Q9Y5Y7 322 aa5.38□□□□□ -1.55
ATXN3-236ENST00000556220 VPS13DQ5THJ4 4388 aa5.37□□□□□ -1.55
ATXN3-236ENST00000556220 A0A087WUU8 490 aa5.37□□□□□ -1.55
ATXN3-236ENST00000556220 TMEM210A6NLX4 147 aa5.37□□□□□ -1.55
ATXN3-236ENST00000556220 M0R129 80 aa5.37□□□□□ -1.55
ATXN3-236ENST00000556220 LDLRAD4O15165 306 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms