RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CD3GP09693 182 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 HIST1H1DP16402 221 aaKnown RBP8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 GNB3P16520 340 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 TMEM50BP56557 158 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 RBM11P57052 281 aaKnown RBP8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 DEFA1P59665 94 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 DEFA3P59666 94 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 ZNF260Q3ZCT1 412 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 NKAPLQ5M9Q1 402 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 ELP2Q6IA86 826 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 MOGAT3Q86VF5 341 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 C11orf53Q8IXP5 236 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 Q8IYB0 196 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM58AQ8N1B3 248 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM89BQ8N5H3 189 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 POC5Q8NA72 575 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 OR52I2Q8NH67 350 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 SMIM4Q8WVI0 70 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 ARHGAP5-AS1Q96IT6 56 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 NEDD4LQ96PU5 975 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 NUDT16L1Q9BRJ7 211 aaKnown RBP8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 PECRQ9BY49 303 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 TLNRD1Q9H1K6 362 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 FN3KRPQ9HA64 309 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 IL19Q9UHD0 177 aa8.18□□□□□ -1.1
HNRNPC-220ENST00000555585 CADP27708 2225 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 MEIOCA2RUB1 952 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 ISPDA4D126 451 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 MEIS3P1A6NDR6 274 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 TMEM235A6NFC5 223 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 WIPF3A6NGB9 483 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 SULT1C2O00338 296 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 AKR7A2O43488 359 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 LANCL1O43813 399 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 RBBP9O75884 186 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 GSTP1P09211 210 aaKnown RBP8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 RNF224P0DH78 156 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 PGA5P0DJD9 388 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 GLRA1P23415 457 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 GNG2P59768 71 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 SNRPD2P62316 118 aaKnown RBP8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 ARFRP1Q13795 201 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 ARL6IP1Q15041 203 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 PDCD1Q15116 288 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 EFNB3Q15768 340 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 SPRNQ5BIV9 151 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 ATAD3CQ5T2N8 411 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 HACD4Q5VWC8 232 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 FIP1L1Q6UN15 594 aaKnown RBP8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 WDR82Q6UXN9 313 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 RTN4RL2Q86UN3 420 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 MUC15Q8N387 334 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 CELF2-AS1Q8N7Q2 184 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 BOLLQ8N9W6 283 aaKnown RBP8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 POC1AQ8NBT0 407 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 Q8NFD4 153 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 LRRC29Q8WV35 223 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 YIPF5Q969M3 257 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 FBXW5Q969U6 566 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 EGLN1Q9GZT9 426 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 MS4A5Q9H3V2 200 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 RHOFQ9HBH0 211 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 DECR2Q9NUI1 292 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 PLEKHJ1Q9NW61 149 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 IL36RNQ9UBH0 155 aa8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 ELF5Q9UKW6 265 aaPredicted RBP8.17□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A10PA6NDY2 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A18PA6NE21 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A16PA6NEW6 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A20PA6NIJ5 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A8PA6NJQ4 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A7PA6NKC0 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FOXI3A8MTJ6 420 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A22PA8MWA6 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A12PA8MX19 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A5PA8MXJ8 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A23PA8MXZ1 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 WNT9BO14905 357 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 ORC5O43913 435 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 NOS1APO75052 506 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 PDCD6O75340 191 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 OR7C1O76099 320 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 PTBP3O95758 552 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FCER2P06734 321 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 ACAA1P09110 424 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A15PP0C7V4 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A13PP0C7W8 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A14PP0C7W9 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM90A24PP0C7X0 464 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 GSTT2BP0CG30 244 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 IGFBP2P18065 325 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 TNFRSF1AP19438 455 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 DUSP1P28562 367 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 GDNFP39905 211 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 ERVK11-1P61568 191 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 CCL8P80075 99 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 CHD3Q12873 2000 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 IKZF1Q13422 519 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 IL13RA2Q14627 380 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 DAZAP2Q15038 168 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms