RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 REG4Q9BYZ8 158 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 NDUFA13Q9P0J0 144 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 MRPS28Q9Y2Q9 187 aaKnown RBP6.76□□□□□ -1.33
LINC01397-201ENST00000554808 CACNG2Q9Y698 323 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 ARHGAP32A7KAX9 2087 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 IGHV4-30-2A0A087WSY4 118 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 IGHV3-64DA0A0J9YX35 117 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A10PA6NDY2 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A18PA6NE21 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A16PA6NEW6 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A20PA6NIJ5 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A8PA6NJQ4 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A7PA6NKC0 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 OR2AT4A6NND4 320 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 NOTOA8MTQ0 251 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A22PA8MWA6 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A12PA8MX19 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A5PA8MXJ8 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A23PA8MXZ1 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 ZNF701M0R085 212 aaPredicted RBP6.75□□□□□ -1.33
LINC01397-201ENST00000554808 AIPO00170 330 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 SH2D1BO14796 132 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 SLC22A1O15245 554 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 SPRY1O43609 319 aaPredicted RBP6.75□□□□□ -1.33
LINC01397-201ENST00000554808 SCGNO76038 276 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 PLATP00750 562 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A15PP0C7V4 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A13PP0C7W8 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A14PP0C7W9 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FAM90A24PP0C7X0 464 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 GTF2F2P13984 249 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 RPS2P15880 293 aaKnown RBP6.75□□□□□ -1.33
LINC01397-201ENST00000554808 ADRA2CP18825 462 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 KCNJ3P48549 501 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 IL13RA1P78552 427 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 ZMYND11Q15326 602 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 RAB11BQ15907 218 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 MPV17LQ2QL34 196 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 ESCO2Q56NI9 601 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 DMRTC1Q5HYR2 192 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 STUMQ69YW2 141 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 CRIP3Q6Q6R5 217 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 USP43Q70EL4 1123 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 LYPD6Q86Y78 171 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 TGIF2LYQ8IUE0 185 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 CHST4Q8NCG5 386 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 OR8B3Q8NGG8 313 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 OR5D18Q8NGL1 313 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 OR5D13Q8NGL4 314 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 KCNG3Q8TAE7 436 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 SLAMF9Q96A28 289 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 ORAI1Q96D31 301 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 NEIL1Q96FI4 390 aaPredicted RBP6.75□□□□□ -1.33
LINC01397-201ENST00000554808 OR8B2Q96RD0 313 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 TMEM246Q9BRR3 403 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 PPIL3Q9H2H8 161 aaKnown RBP6.75□□□□□ -1.33
LINC01397-201ENST00000554808 ZNF665Q9H7R5 613 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 CNTD2Q9H8S5 307 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 ELL3Q9HB65 397 aaPredicted RBP6.75□□□□□ -1.33
LINC01397-201ENST00000554808 PATZ1Q9HBE1 687 aaKnown RBP6.75□□□□□ -1.33
LINC01397-201ENST00000554808 SPACA1Q9HBV2 294 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 TMEM165Q9HC07 324 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 HMG20AQ9NP66 347 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 TREM2Q9NZC2 230 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 MTCH1Q9NZJ7 389 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 STEAP1Q9UHE8 339 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 ING4Q9UNL4 249 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 AK6Q9Y3D8 172 aaKnown RBP6.75□□□□□ -1.33
LINC01397-201ENST00000554808 ABCA1O95477 2261 aa6.75□□□□□ -1.33
LINC01397-201ENST00000554808 FLNAP21333 2647 aaKnown RBP6.74□□□□□ -1.33
LINC01397-201ENST00000554808 ACANP16112 2415 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 FUOMA2VDF0 154 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 IFITM5A6NNB3 132 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 CEACAM18A8MTB9 384 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 A8MXK9 166 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 F5H0A9 414 aaPredicted RBP6.74□□□□□ -1.33
LINC01397-201ENST00000554808 C3orf80F5H4A9 247 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.74□□□□□ -1.33
LINC01397-201ENST00000554808 SIGLEC5O15389 551 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 FOXH1O75593 365 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 HTR3BO95264 441 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 IGHV2-5P01817 119 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 CHRM2P08172 466 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 FOSL1P15407 271 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 ARSBP15848 533 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 PRKACAP17612 351 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 EGR1P18146 543 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 BCL3P20749 454 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 SERPINA2P20848 420 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 GATA3P23771 443 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 CD80P33681 288 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 SDC2P34741 201 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 OR3A4PP47883 348 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 GZMKP49863 264 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 CAV3P56539 151 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 DYNC1I2Q13409 638 aaKnown RBP6.74□□□□□ -1.33
LINC01397-201ENST00000554808 SLC22A6Q4U2R8 563 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 LRRC10Q5BKY1 277 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 AVPI1Q5T686 147 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 GPR107Q5VW38 600 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms