RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PPWD1Q96BP3 646 aaKnown RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 OR2A5Q96R48 311 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 TRIB3Q96RU7 358 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 LYSMD1Q96S90 227 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 SORT1Q99523 831 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 CCDC77Q9BR77 488 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 CHRDL1Q9BU40 450 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 FAIM2Q9BWQ8 316 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 SPNS1Q9H2V7 528 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 GOLPH3Q9H4A6 298 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 METTL7AQ9H8H3 244 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 VPS37BQ9H9H4 285 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 MRPL47Q9HD33 250 aaKnown RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 ADAP2Q9NPF8 381 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF331Q9NQX6 463 aaPredicted RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 EXD2Q9NVH0 621 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 MED29Q9NX70 200 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 SLC25A37Q9NYZ2 338 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 SPATA7Q9P0W8 599 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 SLC7A8Q9UHI5 535 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 BOKQ9UMX3 212 aaPredicted RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 PPIL1Q9Y3C6 166 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 STARD9Q9P2P6 4700 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 TRBV6-6A0A0A6YYG2 114 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 IGHV3-15A0A0B4J1V0 119 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 GOLGA6L4A6NEF3 574 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SLC22A20A6NK97 555 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SIGLEC16A6NMB1 481 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 M0R1B8 84 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SLC31A2O15432 143 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CHST10O43529 356 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PSTPIP1O43586 416 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 NIPSNAP2O75323 286 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 UPK3AO75631 287 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 AQP8O94778 261 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 GLSO94925 669 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 NSA2O95478 260 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 C1orf105O95561 183 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 LSM8O95777 96 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM50AO95807 157 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 IGHV2-5P01817 119 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ALDOBP05062 364 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CALB1P05937 261 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 C2P06681 752 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PSG2P11465 335 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CNR1P21554 472 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 IL32P24001 234 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 LOXP28300 417 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CRYBB2P43320 205 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 YAP1P46937 504 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 LHX2P50458 406 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF83P51522 516 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ATP5IP56385 69 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 UBA52P62987 128 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SLC25A11Q02978 314 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 LOXL1Q08397 574 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 STX4Q12846 297 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SSX2Q16385 188 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 RFX4Q33E94 735 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 FBXL19-AS1Q494R0 122 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 KCTD21Q4G0X4 260 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 AVPI1Q5T686 147 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PDPK2PQ6A1A2 396 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 LCN12Q6JVE5 192 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 TRIM40Q6P9F5 258 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 TTC23LQ6PF05 361 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CNIH2Q6PI25 160 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ANGPTL8Q6UXH0 198 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 RTL4Q6ZR62 310 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF621Q6ZSS3 439 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 NANOGNBQ7Z5D8 188 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF429Q86V71 674 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 THOC6Q86W42 341 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PSTKQ8IV42 348 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SIGLECL1Q8N7X8 197 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ZDHHC22Q8N966 263 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CCDC54Q8NEL0 328 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 NPBQ8NG41 125 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 OR4F15Q8NGB8 312 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 OR9K2Q8NGE7 335 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 OR2L8Q8NGY9 312 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 OR2G3Q8NGZ4 309 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 C10orf105Q8TEF2 133 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ABHD3Q8WU67 409 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 STMN2Q93045 179 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 TUBGCP3Q96CW5 907 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 STARD4Q96DR4 205 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 IMP4Q96G21 291 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 RNF185Q96GF1 192 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 OR8B4Q96RC9 309 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 KCTD14Q9BQ13 255 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SFXN3Q9BWM7 321 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM59Q9BXS4 323 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PKIBQ9C010 78 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ANKRA2Q9H9E1 313 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 UBAP1Q9NZ09 502 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 XCL2Q9UBD3 114 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CRCT1Q9UGL9 99 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 DKKL1Q9UK85 242 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 IKZF2Q9UKS7 526 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms