RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 IGHV1-46P01743 117 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 BDKRB2P30411 391 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 OTX1P32242 354 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-214ENST00000554604 BTCP35070 178 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 GDNFP39905 211 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 EIF2B2P49770 351 aaKnown RBP10.52□□□□□ -0.73
SHMT2-214ENST00000554604 PRKXP51817 358 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 AP3S2P59780 193 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 CCDC92Q53HC0 331 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-214ENST00000554604 Q6ZSR3 168 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 DOK3Q7L591 496 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 KRT74Q7RTS7 529 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 CDH26Q8IXH8 852 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 ZNF283Q8N7M2 679 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 PLPP7Q8NBV4 271 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 OR1M1Q8NGA1 313 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 OR51A2Q8NGJ7 313 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 OR5D14Q8NGL3 314 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 DEDD2Q8WXF8 326 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 CCL17Q92583 94 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 UPRTQ96BW1 309 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 FGGYQ96C11 551 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 TIMD4Q96H15 378 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 DIRC2Q96SL1 478 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 AUNIPQ9H7T9 357 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 MSL2Q9HCI7 577 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 TMEM138Q9NPI0 162 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 DIABLOQ9NR28 239 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 TREM2Q9NZC2 230 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 RHBDD3Q9Y3P4 386 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 NUBP2Q9Y5Y2 271 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 ARHGAP32A7KAX9 2087 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 A0A0B4J293 547 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 A0A0U1RQV5 110 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 GGT3PA6NGU5 568 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 ZSCAN5BA6NJL1 495 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 INMT-MINDY4F8WBC2 141 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 WNT9BO14905 357 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 LDLRAD4O15165 306 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 GSTT2BP0CG30 244 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 RAB6AP20340 208 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 TNFSF4P23510 183 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 SRP9P49458 86 aaKnown RBP10.51□□□□□ -0.73
SHMT2-214ENST00000554604 RAG2P55895 527 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 ECH1Q13011 328 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 PSG7Q13046 419 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 TATDN3Q17R31 274 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 RNASE12Q5GAN4 147 aaKnown RBP10.51□□□□□ -0.73
SHMT2-214ENST00000554604 TMEM255AQ5JRV8 349 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 GLYATL3Q5SZD4 288 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 AVPI1Q5T686 147 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 OLFML2AQ68BL7 652 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 PGAP1Q75T13 922 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 PEG10Q86TG7 708 aaKnown RBP10.51□□□□□ -0.73
SHMT2-214ENST00000554604 GLCCI1Q86VQ1 547 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 OR5L1Q8NGL2 311 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 OR6F1Q8NGZ6 308 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 OR52I2Q8NH67 350 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 OR51E1Q8TCB6 317 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 RAB1CQ92928 201 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 CMBLQ96DG6 245 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 ADAT3Q96EY9 351 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-214ENST00000554604 UQCC2Q9BRT2 126 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 METTL17Q9H7H0 456 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-214ENST00000554604 LPAR2Q9HBW0 351 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 ATPIF1Q9UII2 106 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 PURGQ9UJV8 347 aaKnown RBP10.51□□□□□ -0.73
SHMT2-214ENST00000554604 STARD10Q9Y365 291 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 CUBNO60494 3623 aa10.51□□□□□ -0.73
SHMT2-214ENST00000554604 ANKRD20A5PA0PJZ0 165 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 RNF212BA8MTL3 300 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 J3QW42 95 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 DBHP09172 617 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 ARSBP15848 533 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 ZNF20P17024 532 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 RAB3AP20336 220 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 SRP14P37108 136 aaKnown RBP10.5□□□□□ -0.73
SHMT2-214ENST00000554604 EFNB2P52799 333 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 DVL1P1P54792 670 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-214ENST00000554604 TNFAIP6P98066 277 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-214ENST00000554604 SSBP1Q04837 148 aaKnown RBP10.5□□□□□ -0.73
SHMT2-214ENST00000554604 PLA2G7Q13093 441 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 FAM57BQ71RH2 274 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 OR2Z1Q8NG97 314 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 OR51F2Q8NH61 342 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 SPTSSAQ969W0 71 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 APOBEC3DQ96AK3 386 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-214ENST00000554604 RAB39BQ96DA2 213 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 C1orf159Q96HA4 380 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 PGAM5Q96HS1 289 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 POFUT1Q9H488 388 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 GPR84Q9NQS5 396 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 ZNF319Q9P2F9 582 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 FBLN5Q9UBX5 448 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 ZNF221Q9UK13 617 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 ALG5Q9Y673 324 aa10.5□□□□□ -0.73
SHMT2-214ENST00000554604 SULT1C2O00338 296 aa10.49□□□□□ -0.73
SHMT2-214ENST00000554604 PHF1O43189 567 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-214ENST00000554604 BPNT1O95861 308 aa10.49□□□□□ -0.73
SHMT2-214ENST00000554604 DHFRP00374 187 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms