RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 OR51B6Q9H340 312 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 FAM230AA0A1W2PPH8 454 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 CD37P11049 281 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 CCL1P22362 96 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 CTSSP25774 331 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 FJX1Q86VR8 437 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 GCNT2Q8N0V5 402 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 ZFP62Q8NB50 900 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-212ENST00000554467 GTF3AQ92664 365 aaKnown RBP10.15□□□□□ -0.78
SHMT2-212ENST00000554467 PRSS50Q9UI38 385 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 RAB22AQ9UL26 194 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 RNF222A6NCQ9 220 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 METTL21EPA6NDL7 271 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 ANGPTL7O43827 346 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 CD79AP11912 226 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 SERPINA2P20848 420 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 TNFSF10P50591 281 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 GMFBP60983 142 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 CRIP3Q6Q6R5 217 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 TRAPPC6BQ86SZ2 158 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 MCEMP1Q8IX19 187 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 GABRG1Q8N1C3 465 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 C1orf147Q96MC9 270 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-212ENST00000554467 OR10A2Q9H208 303 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 UPB1Q9UBR1 384 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 TIMM10BQ9Y5J6 103 aa10.15□□□□□ -0.78
SHMT2-212ENST00000554467 TRGV5A0A0B4J1U4 118 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF587BE7ETH6 402 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 OR8U8P0C7N1 319 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 RBM39Q14498 530 aaKnown RBP10.14□□□□□ -0.79
SHMT2-212ENST00000554467 DNM1P46Q6ZS02 220 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 PGAP1Q75T13 922 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF100Q8IYN0 542 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 KCNRGQ8N5I3 272 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 RSRP1Q9BUV0 290 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 EGLN1Q9GZT9 426 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 BSNQ9UPA5 3926 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 TM4SF5O14894 197 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 PPIHO43447 177 aaKnown RBP10.14□□□□□ -0.79
SHMT2-212ENST00000554467 SPRY1O43609 319 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-212ENST00000554467 BPNT1O95861 308 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 ERCC1P07992 297 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF92Q03936 586 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 BPIFB2Q8N4F0 458 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 SLC6A7Q99884 636 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 LPAR5Q9H1C0 372 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF581Q9P0T4 197 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 IGF2RP11717 2491 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 A0A0U1RQV5 110 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 A0A1W2PR80 420 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 OR6C6A6NF89 314 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF736B4DX44 427 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-212ENST00000554467 HLA-AP01891 365 aaKnown RBP10.14□□□□□ -0.79
SHMT2-212ENST00000554467 AKR1C4P17516 323 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 RRADP55042 308 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 C15orf40Q8WUR7 153 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 MAFIPQ8WZ33 124 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 HAS2Q92819 552 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 APH1AQ96BI3 265 aa10.14□□□□□ -0.79
SHMT2-212ENST00000554467 SMG1Q96Q15 3661 aaKnown RBP10.14□□□□□ -0.79
SHMT2-212ENST00000554467 C13orf42A0A1B0GVH6 325 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 CDC14BO60729 498 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 IGLV3-1P01715 115 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 IGHV2-5P01817 119 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 CXADRP78310 365 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 SMCO1Q147U7 214 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF260Q3ZCT1 412 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 HIKESHIQ53FT3 197 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 PLAC9Q5JTB6 97 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 STEAP2Q8NFT2 490 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 VRK1Q99986 396 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-212ENST00000554467 TMEM59Q9BXS4 323 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 TAS2R8Q9NYW2 309 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 FAM96BQ9Y3D0 163 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 V9GYS6 101 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 IGKV3D-15A0A087WSY6 115 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 TMEM14DPA8MWL7 114 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 EEF1E1-BLOC1S5C9J1V9 151 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 FGF16O43320 207 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 FARS2O95363 451 aaKnown RBP10.13□□□□□ -0.79
SHMT2-212ENST00000554467 MMP7P09237 267 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-212ENST00000554467 OR4E1P0C645 316 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 RIPPLY2Q5TAB7 128 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 DRAM2Q6UX65 266 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF584Q8IVC4 421 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF565Q8N9K5 539 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 SEMA6DQ8NFY4 1073 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 WDYHV1Q96HA8 205 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 RHOVQ96L33 236 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 CLCC1Q96S66 551 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF471Q9BX82 626 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-212ENST00000554467 DLL3Q9NYJ7 618 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 LUZP4Q9P127 313 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 TNFSF18Q9UNG2 199 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 ADGRG4Q8IZF6 3080 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 C5orf49A4QMS7 147 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 BCL2L11O43521 198 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 RAD51DO75771 328 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 EDN3P14138 238 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 AKR1C3P42330 323 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms