RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 SELENOIQ9C0D9 397 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 EGLN1Q9GZT9 426 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 BANF2Q9H503 90 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.48□□□□□ -1.37
TDP1-209ENST00000554180 CBLN4Q9NTU7 201 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 PLEKHA6Q9Y2H5 1048 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 ICE1Q9Y2F5 2266 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 A0A0A6YYD4 124 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 A0A1W2PP11 408 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 ISPDA4D126 451 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 SERPINE3A8MV23 424 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 SRRM5B3KS81 715 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 GABARAPH6UMI1 98 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 J3QRK9 145 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 SULT1C2O00338 296 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 SPRY3O43610 288 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 CA11O75493 328 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 RHBDL1O75783 438 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 UPK1BO75841 260 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 NXPH2O95156 264 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 HLA-DQB1P01920 261 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 GRPP07492 148 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 MELTFP08582 738 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 GSTP1P09211 210 aaKnown RBP6.47□□□□□ -1.37
TDP1-209ENST00000554180 HIST1H1DP16402 221 aaKnown RBP6.47□□□□□ -1.37
TDP1-209ENST00000554180 BCL3P20749 454 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 PMELP40967 661 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 NPBWR2P48146 333 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 VEGFCP49767 419 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 SSBP1Q04837 148 aaKnown RBP6.47□□□□□ -1.37
TDP1-209ENST00000554180 PNLIPRP3Q17RR3 467 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 ZNF181Q2M3W8 571 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 MPV17LQ2QL34 196 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 SMIM21Q3B7S5 101 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 PYDC2Q56P42 97 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 HACD4Q5VWC8 232 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 C16orf87Q6PH81 154 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 DNM1P46Q6ZS02 220 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 FAM58AQ8N1B3 248 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 ITLN1Q8WWA0 313 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 DEDD2Q8WXF8 326 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 EMG1Q92979 244 aaKnown RBP6.47□□□□□ -1.37
TDP1-209ENST00000554180 RAB3CQ96E17 227 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 ABHD1Q96SE0 405 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 SDHCQ99643 169 aaPredicted RBP6.47□□□□□ -1.37
TDP1-209ENST00000554180 NICN1Q9BSH3 213 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 AUNIPQ9H7T9 357 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 IFT22Q9H7X7 185 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 SAP30LQ9HAJ7 183 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 SCPEP1Q9HB40 452 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 SPACA1Q9HBV2 294 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 HES4Q9HCC6 221 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 DECR2Q9NUI1 292 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 RBFOX1Q9NWB1 397 aaKnown RBP6.47□□□□□ -1.37
TDP1-209ENST00000554180 RASL12Q9NYN1 266 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 RCC2Q9P258 522 aaKnown RBP6.47□□□□□ -1.37
TDP1-209ENST00000554180 HSF4Q9ULV5 492 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 ST3GAL6Q9Y274 331 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 NPTNQ9Y639 398 aa6.47□□□□□ -1.37
TDP1-209ENST00000554180 TRAV18A0A075B6X5 111 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 hCG_1807616A0A1W2PRN6 198 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 LRRC30A6NM36 301 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 PYCARD-AS1I3L0S3 204 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 MFNGO00587 321 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 GEMIN2O14893 280 aaKnown RBP6.46□□□□□ -1.38
TDP1-209ENST00000554180 PDCD6O75340 191 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 GLAP06280 429 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 LPLP06858 475 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 DANCRP0C864 163 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 IL7P13232 177 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 PRKACAP17612 351 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 GABRR1P24046 479 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 CHATP28329 748 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 BLVRBP30043 206 aaPredicted RBP6.46□□□□□ -1.38
TDP1-209ENST00000554180 PRSS3P35030 304 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 ACTBP60709 375 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 ACTG1P63261 375 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 TLE4Q04727 773 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 SCN1BQ07699 218 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 ZNF146Q15072 292 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 MPPED2Q15777 294 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 TAF9Q16594 264 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 PIGYQ3MUY2 71 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 MOGAT2Q3SYC2 334 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 ZNF260Q3ZCT1 412 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 PRAMEF6Q5VXH4 476 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 TRIQKQ629K1 86 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 C11orf71Q6IPW1 123 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 Q6ZTK2 550 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 SNX29P2Q8IUI4 249 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 IZUMO1Q8IYV9 350 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 C1orf87Q8N0U7 546 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 OR11L1Q8NGX0 322 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 LRRC29Q8WV35 223 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 ST8SIA4Q92187 359 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 TRIM63Q969Q1 353 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 NEDD4LQ96PU5 975 aa6.46□□□□□ -1.38
TDP1-209ENST00000554180 TRAF4Q9BUZ4 470 aaPredicted RBP6.46□□□□□ -1.38
TDP1-209ENST00000554180 SEBOXQ9HB31 216 aaPredicted RBP6.46□□□□□ -1.38
TDP1-209ENST00000554180 GCM1Q9NP62 436 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms