RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 MND1Q9BWT6 205 aa19.24■□□□□ 0.67
NEK9-203ENST00000553945 TAS2R4Q9NYW5 299 aa19.24■□□□□ 0.67
NEK9-203ENST00000553945 NUP50Q9UKX7 468 aa19.24■□□□□ 0.67
NEK9-203ENST00000553945 RAB26Q9ULW5 256 aa19.24■□□□□ 0.67
NEK9-203ENST00000553945 IGHV3OR16-10A0A075B7F0 116 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 ZNF879B4DU55 563 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 ALX3O95076 343 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 RAB3AP20336 220 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 BCL3P20749 454 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 NPBWR2P48146 333 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 SLC35A2P78381 396 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 DOC2BQ14184 412 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 Q8IYB0 196 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 OR5D18Q8NGL1 313 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 C22orf15Q8WYQ4 148 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 EMG1Q92979 244 aaKnown RBP19.23■□□□□ 0.67
NEK9-203ENST00000553945 DCTN5Q9BTE1 182 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 CDCA4Q9BXL8 241 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 CNTD2Q9H8S5 307 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 ELL3Q9HB65 397 aaPredicted RBP19.23■□□□□ 0.67
NEK9-203ENST00000553945 PCDHGB5Q9Y5G0 923 aa19.23■□□□□ 0.67
NEK9-203ENST00000553945 TCF21O43680 179 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 ANGPTL7O43827 346 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 TOX4O94842 621 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 CELP19835 753 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 CAV3P56539 151 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 ARF6P62330 175 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 SRSF2Q01130 221 aaKnown RBP19.22■□□□□ 0.67
NEK9-203ENST00000553945 KISS1Q15726 138 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 YIF1BQ5BJH7 314 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 METTL11BQ5VVY1 283 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 BPIFB2Q8N4F0 458 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 ZNF561Q8N587 486 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 LY6G5BQ8NDX9 201 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 PGLYRP3Q96LB9 341 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 WDFY2Q96P53 400 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 DUSP21Q9H596 190 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 RBFOX1Q9NWB1 397 aaKnown RBP19.22■□□□□ 0.67
NEK9-203ENST00000553945 ONECUT1Q9UBC0 465 aa19.22■□□□□ 0.67
NEK9-203ENST00000553945 TRAV40A0A0B4J280 105 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 MAGEB3O15480 346 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 RGS9O75916 674 aaPredicted RBP19.21■□□□□ 0.67
NEK9-203ENST00000553945 SFTPBP07988 381 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 IGHV4-38-2P0DP08 117 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 CALCBP10092 127 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 FPR2P25090 351 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 ASPHD2Q6ICH7 369 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 ZNF529Q6P280 563 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 SATL1Q86VE3 508 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 OR51A2Q8NGJ7 313 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 SLC6A7Q99884 636 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 ZNF69Q9UC07 566 aa19.21■□□□□ 0.67
NEK9-203ENST00000553945 TRBV5-5A0A0J9YX44 114 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 RGS10O43665 173 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 TMEM225BP0DP42 221 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 CRHBPP24387 322 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 RPS11P62280 158 aaKnown RBP eCLIP19.2■□□□□ 0.66
NEK9-203ENST00000553945 PPP3R1P63098 170 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 Q499Y3 187 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 CRIP3Q6Q6R5 217 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 FIP1L1Q6UN15 594 aaKnown RBP19.2■□□□□ 0.66
NEK9-203ENST00000553945 FAM58AQ8N1B3 248 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 ZNF418Q8TF45 676 aaPredicted RBP19.2■□□□□ 0.66
NEK9-203ENST00000553945 ORAI1Q96D31 301 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 OR5M11Q96RB7 305 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 GPER1Q99527 375 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 CCDC90BQ9GZT6 254 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 SIRPDQ9H106 197 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 IL36RNQ9UBH0 155 aa19.2■□□□□ 0.66
NEK9-203ENST00000553945 IGKV1-12A0A0C4DH73 117 aa19.19■□□□□ 0.66
NEK9-203ENST00000553945 A0A1W2PQ09 198 aa19.19■□□□□ 0.66
NEK9-203ENST00000553945 IGKV1D-12P01611 117 aa19.19■□□□□ 0.66
NEK9-203ENST00000553945 PRKACAP17612 351 aa19.19■□□□□ 0.66
NEK9-203ENST00000553945 SNU13P55769 128 aaKnown RBP19.19■□□□□ 0.66
NEK9-203ENST00000553945 COL10A1Q03692 680 aa19.19■□□□□ 0.66
NEK9-203ENST00000553945 IRF3Q14653 427 aa19.19■□□□□ 0.66
NEK9-203ENST00000553945 SPHARQ15513 63 aa19.19■□□□□ 0.66
NEK9-203ENST00000553945 MED22Q15528 200 aa19.19■□□□□ 0.66
NEK9-203ENST00000553945 RBM48Q5RL73 367 aaKnown RBP19.19■□□□□ 0.66
NEK9-203ENST00000553945 SAXO1Q8IYX7 474 aa19.19■□□□□ 0.66
NEK9-203ENST00000553945 ASCC1Q8N9N2 400 aaKnown RBP19.19■□□□□ 0.66
NEK9-203ENST00000553945 C8orf46Q8TAG6 207 aa19.19■□□□□ 0.66
NEK9-203ENST00000553945 CPNE2Q96FN4 548 aaPredicted RBP19.19■□□□□ 0.66
NEK9-203ENST00000553945 TBX15Q96SF7 602 aa19.19■□□□□ 0.66
NEK9-203ENST00000553945 ZNF184Q99676 751 aaPredicted RBP19.19■□□□□ 0.66
NEK9-203ENST00000553945 LSM2Q9Y333 95 aaKnown RBP19.19■□□□□ 0.66
NEK9-203ENST00000553945 CD1AP06126 327 aa19.18■□□□□ 0.66
NEK9-203ENST00000553945 CHRM2P08172 466 aa19.18■□□□□ 0.66
NEK9-203ENST00000553945 MMP9P14780 707 aa19.18■□□□□ 0.66
NEK9-203ENST00000553945 DUSP1P28562 367 aa19.18■□□□□ 0.66
NEK9-203ENST00000553945 ZP1P60852 638 aa19.18■□□□□ 0.66
NEK9-203ENST00000553945 BDH1Q02338 343 aa19.18■□□□□ 0.66
NEK9-203ENST00000553945 ACSM1Q08AH1 577 aa19.18■□□□□ 0.66
NEK9-203ENST00000553945 ZSCAN4Q8NAM6 433 aaPredicted RBP19.18■□□□□ 0.66
NEK9-203ENST00000553945 OR52N4Q8NGI2 321 aa19.18■□□□□ 0.66
NEK9-203ENST00000553945 OR14A2Q96R54 314 aa19.18■□□□□ 0.66
NEK9-203ENST00000553945 SUCNR1Q9BXA5 334 aa19.18■□□□□ 0.66
NEK9-203ENST00000553945 MS4A7Q9GZW8 240 aaPredicted RBP19.18■□□□□ 0.66
NEK9-203ENST00000553945 KPTNQ9Y664 436 aa19.18■□□□□ 0.66
NEK9-203ENST00000553945 A0A1W2PPK0 400 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms