RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 FAM180AQ6UWF9 173 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 SULT4A1Q9BR01 284 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 NUDT16L1Q9BRJ7 211 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 FN3KRPQ9HA64 309 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 ZNF701Q9NV72 531 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 EIF3KQ9UBQ5 218 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 ST3GAL6Q9Y274 331 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 FIGNL2A6NMB9 653 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 ZNF205O95201 554 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 SELEP16581 610 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 ATPAF1Q5TC12 328 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 ASCL4Q6XD76 172 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 MUC20Q8N307 709 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 CDH20Q9HBT6 801 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 NCOR2Q9Y618 2525 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 TMEM82A0PJX8 343 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 SIX6O95475 246 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 CRYABP02511 175 aaKnown RBP10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 DUSP1P28562 367 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 PTGER4P35408 488 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 PPP1CBP62140 327 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 SNRPD2P62316 118 aaKnown RBP10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 CEACAM21Q3KPI0 293 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 C1orf185Q5T7R7 199 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 ZNF626Q68DY1 528 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 OSR2Q8N2R0 312 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 OR10AD1Q8NGE0 317 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 SLC25A40Q8TBP6 338 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 MICU1Q9BPX6 476 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 AK3Q9UIJ7 227 aa10.92□□□□□ -0.66
VIPAS39-206ENST00000553888 UBE2QL1A1L167 161 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 CST4P01036 141 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 MPV17P39210 176 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 HOXA4Q00056 320 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 ZNF474Q6S9Z5 364 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 C5orf24Q7Z6I8 188 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 OR11H4Q8NGC9 324 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 GRPEL2Q8TAA5 225 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 MTCH1Q9NZJ7 389 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 MGAT4CQ9UBM8 478 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 CHD3Q12873 2000 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 AKR7A2O43488 359 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 AMY2BP19961 511 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 OPRM1P35372 400 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 RPUSD3Q6P087 351 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 HAGHLQ6PII5 290 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 OR1J1Q8NGS3 322 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 EMG1Q92979 244 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 PPP1R14DQ9NXH3 145 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 TINAGQ9UJW2 476 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 KALRNO60229 2985 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 DISC1C4P0D8 188 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 PRAF2O60831 178 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 CECR9P0C854 216 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 MECP2P51608 486 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 GMFBP60983 142 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 PNLIPRP3Q17RR3 467 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 ZBTB37Q5TC79 503 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 ZNF324BQ6AW86 544 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 Q6ZPA2 131 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 DPPA2Q7Z7J5 298 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 C17orf78Q8N4C9 275 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 ADAD2Q8NCV1 583 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 DEDD2Q8WXF8 326 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 OR5P3Q8WZ94 311 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 OCSTAMPQ9BR26 566 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 SCP2D1Q9UJQ7 156 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 SHANK1Q9Y566 2161 aa10.91□□□□□ -0.66
VIPAS39-206ENST00000553888 RAB19A4D1S5 217 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 ANKRD30BLA7E2S9 258 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 H0YL77 283 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 HSPB6O14558 160 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 RRP8O43159 456 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 CREBL2O60519 120 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 RHBDL1O75783 438 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 C1QBP02746 253 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 PI3P19957 117 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 VAMP1P23763 118 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 CHATP28329 748 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 GZMKP49863 264 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 UCP2P55851 309 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 BAMBIQ13145 260 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 SEZ6L2Q6UXD5 910 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 NLRC3Q7RTR2 1065 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 BHLHA15Q7RTS1 189 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 CSNK2A3Q8NEV1 391 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 PXT1Q8NFP0 134 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 MARCH1Q8TCQ1 289 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 ANAPC10Q9UM13 185 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 MEIKINA0A087WXM9 373 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 OR7C1O76099 320 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 IL2RAP01589 272 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 IGKV3-15P01624 115 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 ANXA3P12429 323 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 NPY4RP50391 375 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 TDGF1P3P51864 188 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 RBM11P57052 281 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 MEF2DQ14814 521 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 WDR86Q86TI4 376 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 FAM57AQ8TBR7 257 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms