RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 KIAA0232Q92628 1395 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 JCADQ9P266 1359 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 SPTBN5Q9NRC6 3674 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 WDR7Q9Y4E6 1490 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 URB2Q14146 1524 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 CACNA1BQ00975 2339 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 VWDEQ8N2E2 1590 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 ZNF462Q96JM2 2506 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 A0A0U1RQV1 116 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 M0QXV9 152 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 BPY2O14599 106 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 PRMT5O14744 637 aaPredicted RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 KLRC4O43908 158 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 CCDC22O60826 627 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 POP7O75817 140 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 SCELO95171 688 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 H6PDO95479 791 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 IFNA5P01569 189 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 FTH1P02794 183 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 CD74P04233 296 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 RPN2P04844 631 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 RBP1P09455 135 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 OCMP0CE72 109 aaPredicted RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 SMIM6P0DI80 62 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 RD3LP0DJH9 198 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 HSPD1P10809 573 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 TCP1P17987 556 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 RAB3AP20336 220 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 F8A1P23610 371 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 GTF2E2P29084 291 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 ERP29P30040 261 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 KDELR2P33947 212 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 PHBP35232 272 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 UGT2B10P36537 528 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 ARR3P36575 388 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 COILP38432 576 aaPredicted RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 HSPA9P38646 679 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 OPRK1P41145 380 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 MAGEA3P43357 314 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 MAGEA6P43360 314 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 ACOT2P49753 483 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 RGS6P49758 472 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 TPMTP51580 245 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 CRYBA4P53673 196 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 ATP1B3P54709 279 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 CLDN18P56856 261 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 MLF1P58340 268 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 NUTF2P61970 127 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 MRPS22P82650 360 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 GTF2BQ00403 316 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 APOFQ13790 326 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 GRK1Q15835 563 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 AKIRIN2Q53H80 203 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 TNFAIP8L3Q5GJ75 292 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 FAM78AQ5JUQ0 283 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 TIMM23BQ5SRD1 257 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 ANKRD22Q5VYY1 191 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 SLC8B1Q6J4K2 584 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 RPL13AP3Q6NVV1 102 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 TMEM107Q6UX40 140 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 S100A7AQ86SG5 101 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 DHDDSQ86SQ9 333 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 NT5DC3Q86UY8 548 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 TMEM25Q86YD3 366 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 RAB43Q86YS6 212 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 CALHM1Q8IU99 346 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 SYS1Q8N2H4 156 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 RIBC1Q8N443 379 aaPredicted RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 UBL4BQ8N7F7 174 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 OR51D1Q8NGF3 324 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 OR5T3Q8NGG3 340 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 OR9A2Q8NGT5 310 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 C15orf40Q8WUR7 153 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 CDS1Q92903 461 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 DCPSQ96C86 337 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 CCDC124Q96CT7 223 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 L3HYPDHQ96EM0 354 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 MED8Q96G25 268 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 C14orf144Q96I85 54 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 RARRES2Q99969 163 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 HOPXQ9BPY8 73 aaPredicted RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 UTP23Q9BRU9 249 aaKnown RBP1.56□□□□□ -2.16
VRK1-202ENST00000553683 TMEM109Q9BVC6 243 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 SLC25A2Q9BXI2 301 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 MAP1LC3CQ9BXW4 147 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 NEUROG2Q9H2A3 272 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 ANKRD19PQ9H560 264 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 TMEM38AQ9H6F2 299 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 KIR3DX1Q9H7L2 352 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 HRASLSQ9HDD0 168 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 ABCB9Q9NP78 766 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 PRSS16Q9NQE7 514 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 FBXO8Q9NRD0 319 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 FAM49BQ9NUQ9 324 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 PLEKHJ1Q9NW61 149 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 SDHAF2Q9NX18 166 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 RWDD2AQ9UIY3 292 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 OR52A1Q9UKL2 312 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 GUCA1BQ9UMX6 200 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 GOLT1BQ9Y3E0 138 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms