RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 IKZF1Q13422 519 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 RSU1Q15404 277 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 SYT6Q5T7P8 510 aaPredicted RBP11.54□□□□□ -0.56
TUBB3-202ENST00000553656 ATPAF1Q5TC12 328 aaPredicted RBP11.54□□□□□ -0.56
TUBB3-202ENST00000553656 WDR25Q64LD2 544 aaPredicted RBP11.54□□□□□ -0.56
TUBB3-202ENST00000553656 GLT8D1Q68CQ7 371 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 TMEM91Q6ZNR0 172 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 Q71RC1 249 aaPredicted RBP11.54□□□□□ -0.56
TUBB3-202ENST00000553656 CDH26Q8IXH8 852 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 FAM58AQ8N1B3 248 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 FAM216BQ8N7L0 139 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 PXT1Q8NFP0 134 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 MUL1Q969V5 352 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 EXOSC4Q9NPD3 245 aaKnown RBP11.54□□□□□ -0.56
TUBB3-202ENST00000553656 PCDHB16Q9NRJ7 776 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 RBFOX1Q9NWB1 397 aaKnown RBP11.54□□□□□ -0.56
TUBB3-202ENST00000553656 HIF1ANQ9NWT6 349 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 CTSZQ9UBR2 303 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 CELSR1Q9NYQ6 3014 aa11.54□□□□□ -0.56
TUBB3-202ENST00000553656 IGKV1D-17A0A075B6S4 117 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 A0A0G2JMP0 313 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 A0A0X1KG70 313 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 MAGEA13PA6NCF6 341 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 A8MXK9 166 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 DVL1O14640 695 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 TNFRSF13BO14836 293 aaPredicted RBP11.53□□□□□ -0.56
TUBB3-202ENST00000553656 CSTBP04080 98 aaKnown RBP11.53□□□□□ -0.56
TUBB3-202ENST00000553656 GALP22466 123 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 PRDX2P32119 198 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 PTGFRP43088 359 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 NPBWR2P48146 333 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 CAPZA1P52907 286 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 SNU13P55769 128 aaKnown RBP11.53□□□□□ -0.56
TUBB3-202ENST00000553656 DCAF12L2Q5VW00 463 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 CD276Q5ZPR3 534 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 ZNF788Q6ZQV5 615 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 RNF144BQ7Z419 303 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 ZNF561Q8N587 486 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 TMEM185AQ8NFB2 350 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 OR4M2Q8NGB6 313 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 ST8SIA4Q92187 359 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 FOXRED1Q96CU9 486 aaPredicted RBP11.53□□□□□ -0.56
TUBB3-202ENST00000553656 UQCC2Q9BRT2 126 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 METTL9Q9H1A3 318 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 STUB1Q9UNE7 303 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 SSR3Q9UNL2 185 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 ING4Q9UNL4 249 aa11.53□□□□□ -0.56
TUBB3-202ENST00000553656 LOC105371242A0A075B767 164 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 IGKV1-12A0A0C4DH73 117 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 TRDV1A0A1B0GX56 115 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 F8VVB4 439 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 F8VWA3 439 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 GPR37O15354 613 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 SIGLEC5O15389 551 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 ZNF780AO75290 641 aaPredicted RBP11.52□□□□□ -0.57
TUBB3-202ENST00000553656 HTR3BO95264 441 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 IGKV1D-12P01611 117 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 CALCBP10092 127 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 GATA3P23771 443 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 MTNR1BP49286 362 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 GP2P55259 537 aaKnown RBP11.52□□□□□ -0.57
TUBB3-202ENST00000553656 GPR176Q14439 515 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 SPIN3Q5JUX0 258 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 AWAT2Q6E213 333 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 CD200R1LQ6Q8B3 271 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 BTNL3Q6UXE8 466 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 SDSLQ96GA7 329 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 GAFA1Q96PS6 74 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 NKX3-1Q99801 234 aaPredicted RBP11.52□□□□□ -0.57
TUBB3-202ENST00000553656 PPIL3Q9H2H8 161 aaKnown RBP11.52□□□□□ -0.57
TUBB3-202ENST00000553656 CNTD2Q9H8S5 307 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 HMG20AQ9NP66 347 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 SLC25A10Q9UBX3 287 aaPredicted RBP11.52□□□□□ -0.57
TUBB3-202ENST00000553656 ZNF222Q9UK12 451 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 GSTK1Q9Y2Q3 226 aa11.52□□□□□ -0.57
TUBB3-202ENST00000553656 MRPS28Q9Y2Q9 187 aaKnown RBP11.52□□□□□ -0.57
TUBB3-202ENST00000553656 VPS13CQ709C8 3753 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 ABCA1O95477 2261 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 PPIAL4CA0A0B4J2A2 164 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 KIAA1324LA8MWY0 1029 aaPredicted RBP11.51□□□□□ -0.57
TUBB3-202ENST00000553656 PDCD5O14737 125 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 ENSAO43768 121 aaKnown RBP11.51□□□□□ -0.57
TUBB3-202ENST00000553656 CDRT1O95170 752 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 ECDO95905 644 aaPredicted RBP11.51□□□□□ -0.57
TUBB3-202ENST00000553656 HAND1O96004 215 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 TFF1P04155 84 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 SFTPBP07988 381 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 CHRM2P08172 466 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 CD36P16671 472 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 NDUFB7P17568 137 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 AMY2BP19961 511 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 HNF1AP20823 631 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 ZFP36P26651 326 aaKnown RBP11.51□□□□□ -0.57
TUBB3-202ENST00000553656 RANBP1P43487 201 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 CEBPDP49716 269 aaPredicted RBP11.51□□□□□ -0.57
TUBB3-202ENST00000553656 PSMD7P51665 324 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 FGF12P61328 243 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 C11orf91Q3C1V1 193 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 TIMM50Q3ZCQ8 353 aa11.51□□□□□ -0.57
TUBB3-202ENST00000553656 FAHD2BQ6P2I3 314 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms