RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 RNF122Q9H9V4 155 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 ZFP57Q9NU63 452 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 KCNIP3Q9Y2W7 256 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 DCHS1Q96JQ0 3298 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 FAM230AA0A1W2PPH8 454 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 ADAP1O75689 374 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 IFNA21P01568 189 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 MMP7P09237 267 aaPredicted RBP11.21□□□□□ -0.62
SHMT2-205ENST00000553474 OR5H8P0DN80 308 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 RPS18P62269 152 aaKnown RBP11.21□□□□□ -0.62
SHMT2-205ENST00000553474 FAM3AP98173 230 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 BEX5Q5H9J7 111 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 COLCA1Q6ZS62 124 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 TIPARPQ7Z3E1 657 aaKnown RBP11.21□□□□□ -0.62
SHMT2-205ENST00000553474 Q8NFD4 153 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 ROBO4Q8WZ75 1007 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 DEPPQ9NTK1 212 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 LRFN1Q9P244 771 aa11.21□□□□□ -0.62
SHMT2-205ENST00000553474 A0A1W2PNU3 283 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-205ENST00000553474 H0YIZ8 118 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 MRPL33O75394 65 aaKnown RBP11.2□□□□□ -0.62
SHMT2-205ENST00000553474 FCGR3AP08637 254 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 ID4P47928 161 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 UCP3P55916 312 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 CLDN15P56746 228 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 HGFACQ04756 655 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 PDZK1IP1Q13113 114 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 SRSF7Q16629 238 aaKnown RBP eCLIP11.2□□□□□ -0.62
SHMT2-205ENST00000553474 NKAPLQ5M9Q1 402 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 FAM74A1Q5RGS3 127 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 TMEM164Q5U3C3 297 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.2□□□□□ -0.62
SHMT2-205ENST00000553474 SLC38A6Q8IZM9 456 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 LRTM2Q8N967 370 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 FNDC9Q8TBE3 224 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 SAT2Q96F10 170 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-205ENST00000553474 IP6K3Q96PC2 410 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 SLC6A15Q9H2J7 730 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 OPA3Q9H6K4 179 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 TUBD1Q9UJT1 453 aa11.2□□□□□ -0.62
SHMT2-205ENST00000553474 NOSIPQ9Y314 301 aaKnown RBP11.2□□□□□ -0.62
SHMT2-205ENST00000553474 IGKV1-27A0A075B6S5 117 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 CD79AP11912 226 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 PI3P19957 117 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 SPINK2P20155 84 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 SMCO1Q147U7 214 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 TAF9Q16594 264 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 TMEM211Q6ICI0 200 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 TMPRSS7Q7RTY8 843 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 SKA3Q8IX90 412 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 SAXO1Q8IYX7 474 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 AKR7LQ8NHP1 331 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 ARL11Q969Q4 196 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 OR10C1Q96KK4 312 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 SYT3Q9BQG1 590 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 SUCNR1Q9BXA5 334 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF703Q9H7S9 590 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF286AQ9HBT8 521 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 CYTL1Q9NRR1 136 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 DCAF16Q9NXF7 216 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 AK3Q9UIJ7 227 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 PCDHB10Q9UN67 800 aa11.19□□□□□ -0.62
SHMT2-205ENST00000553474 LGALS8O00214 317 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 PDCD6O75340 191 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 KNG1P01042 644 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 GAPDHP04406 335 aaKnown RBP11.18□□□□□ -0.62
SHMT2-205ENST00000553474 PTGER4P35408 488 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 RAB32Q13637 225 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 ABHD17BQ5VST6 288 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 UNQ6126/PRO20091Q6UXV3 157 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 IL34Q6ZMJ4 242 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 Q6ZS49 121 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 OR2M7Q8NG81 312 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF775Q96BV0 537 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-205ENST00000553474 RRNAD1Q96FB5 475 aaKnown RBP11.18□□□□□ -0.62
SHMT2-205ENST00000553474 THOC3Q96J01 351 aaKnown RBP11.18□□□□□ -0.62
SHMT2-205ENST00000553474 C12orf4Q9NQ89 552 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 IGKV1D-8A0A087WSZ0 117 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF850A8MQ14 1090 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF724A8MTY0 619 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 SPRY1O43609 319 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-205ENST00000553474 ANGPTL7O43827 346 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 TNFSF15O95150 251 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF728P0DKX0 622 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF92Q03936 586 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 MALLQ13021 153 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 RBM39Q14498 530 aaKnown RBP11.18□□□□□ -0.62
SHMT2-205ENST00000553474 DMRTC1Q5HYR2 192 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 PABPC1L2AQ5JQF8 200 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 PLCXD3Q63HM9 321 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 DPPA2Q7Z7J5 298 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 OR10AD1Q8NGE0 317 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 ABHD3Q8WU67 409 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 MAFIPQ8WZ33 124 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 CNTNAP3BQ96NU0 1288 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 FAAP24Q9BTP7 215 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 CNTNAP3Q9BZ76 1288 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 SLC5A7Q9GZV3 580 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 PLEKHA2Q9HB19 425 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 OR5AC2Q9NZP5 309 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms