RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 OLFML2AQ68BL7 652 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 TMEM200BQ69YZ2 307 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 SLC25A26Q70HW3 274 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 MKXQ8IYA7 352 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 ENTHD1Q8IYW4 607 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 BATF2Q8N1L9 274 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 ASCC1Q8N9N2 400 aaKnown RBP10.59□□□□□ -0.71
ACTN1-207ENST00000553290 SLAMF9Q96A28 289 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 ADAT3Q96EY9 351 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-207ENST00000553290 PELI1Q96FA3 418 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 C4orf36Q96KX1 117 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 SLC29A1Q99808 456 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 HEXA-AS1Q9H8Q6 139 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 SEBOXQ9HB31 216 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-207ENST00000553290 AASSQ9UDR5 926 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 HHLA2Q9UM44 414 aa10.59□□□□□ -0.71
ACTN1-207ENST00000553290 CLPSL1A2RUU4 121 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 ANGPTL7O43827 346 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 ATF1P18846 271 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 COL10A1Q03692 680 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 RAB40BQ12829 278 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 MRPL28Q13084 256 aaKnown RBP10.58□□□□□ -0.72
ACTN1-207ENST00000553290 ALKBH1Q13686 389 aaKnown RBP10.58□□□□□ -0.72
ACTN1-207ENST00000553290 TAF9Q16594 264 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 HCP5Q6MZN7 132 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 LHFPL2Q6ZUX7 228 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 SYS1Q8N2H4 156 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 PNKDQ8N490 385 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 BEND2Q8NDZ0 799 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 OR4M1Q8NGD0 313 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 OR5R1Q8NH85 324 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 EMG1Q92979 244 aaKnown RBP10.58□□□□□ -0.72
ACTN1-207ENST00000553290 SPSB1Q96BD6 273 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 FGGYQ96C11 551 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 ALG8Q9BVK2 526 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 INPP5EQ9NRR6 644 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 FAM118AQ9NWS6 357 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
ACTN1-207ENST00000553290 PKD1L1Q8TDX9 2849 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 IGKV1-9A0A0C4DH69 117 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 TRBV2A0A0J9YWF9 115 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 OR4C45A6NMZ5 311 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 F8VVB4 439 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 F8VWA3 439 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 INMTO95050 263 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 IGHA1P01876 353 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 OCM2P0CE71 109 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 OCMP0CE72 109 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-207ENST00000553290 AZGP1P25311 298 aaKnown RBP10.57□□□□□ -0.72
ACTN1-207ENST00000553290 MTCP1P56278 107 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 ERVFRD-1P60508 538 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 KLHL22Q53GT1 634 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 C17orf107Q6ZR85 190 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 GDPD3Q7L5L3 318 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 LHFPL3Q86UP9 236 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 C11orf42Q8N5U0 333 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 ZNF676Q8N7Q3 588 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 ZSCAN4Q8NAM6 433 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-207ENST00000553290 OR13C3Q8NGS6 347 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 HAVCR2Q8TDQ0 301 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 WFDC12Q8WWY7 111 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 SNX22Q96L94 193 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 RDH12Q96NR8 316 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 NEK6Q9HC98 313 aa10.57□□□□□ -0.72
ACTN1-207ENST00000553290 MRPS18AQ9NVS2 196 aaKnown RBP10.57□□□□□ -0.72
ACTN1-207ENST00000553290 RPL36Q9Y3U8 105 aaKnown RBP10.57□□□□□ -0.72
ACTN1-207ENST00000553290 ZNF737O75373 536 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 BAG2O95816 211 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 RBP4P02753 201 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 MT-ND2P03891 347 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 CCL3L1P16619 93 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 TGFBR2P37173 567 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 POU3F4P49335 361 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 LGALS4P56470 323 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 EDDM3BP56851 147 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 MEF2CQ06413 473 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-207ENST00000553290 PDZK1IP1Q13113 114 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 ZNF273Q14593 569 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 ZSCAN26Q16670 478 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 DHRS7BQ6IAN0 325 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-207ENST00000553290 OR8H2Q8N162 312 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 FAM58AQ8N1B3 248 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 ZNF555Q8NEP9 628 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 LINC01006Q8NI28 216 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 STMN2Q93045 179 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 OPALINQ96PE5 141 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 MEGF9Q9H1U4 602 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 AMBNQ9NP70 447 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 ERVK13-1Q9NX77 482 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 SMPD3Q9NY59 655 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-207ENST00000553290 GLS2Q9UI32 602 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 MYRFQ9Y2G1 1151 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 RNF114Q9Y508 228 aa10.56□□□□□ -0.72
ACTN1-207ENST00000553290 MGAM2Q2M2H8 2515 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 DSCAML1Q8TD84 2053 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 TMEM212A6NML5 194 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 C17orf98A8MV24 154 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 HAND1O96004 215 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 CCDC159P0C7I6 412 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 ZNF728P0DKX0 622 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms