RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 BSCL2Q96G97 398 aaPredicted RBP9.69□□□□□ -0.86
LINC00661-204ENST00000549354 SGCZQ96LD1 299 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 FAM206AQ9NX38 181 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 B3GAT1Q9P2W7 334 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 PIGLQ9Y2B2 252 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 MED13Q9UHV7 2174 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 A6NLC8 198 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 TMEM127O75204 238 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 IL2RAP01589 272 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 PCK2Q16822 640 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 HOGA1Q86XE5 327 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 ZDHHC22Q8N966 263 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 THRSPQ92748 146 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 HDGFL3Q9Y3E1 203 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 LHFPL6Q9Y693 200 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 A0A096LPE4 126 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 A0A1W2PPZ6 126 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 H3BP45 60 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 CDC14BO60729 498 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 CSTBP04080 98 aaKnown RBP9.68□□□□□ -0.86
LINC00661-204ENST00000549354 SERPINA7P05543 415 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 MELTFP08582 738 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 CCL3P10147 92 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 LIFP15018 202 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 HOXA1P49639 335 aaPredicted RBP9.68□□□□□ -0.86
LINC00661-204ENST00000549354 IGSF11Q5DX21 431 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 NKAIN3Q8N8D7 197 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 ZNF2Q9BSG1 426 aaPredicted RBP9.68□□□□□ -0.86
LINC00661-204ENST00000549354 IFT22Q9H7X7 185 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 FOXJ2Q9P0K8 574 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 FBXO7Q9Y3I1 522 aa9.68□□□□□ -0.86
LINC00661-204ENST00000549354 SRSF10O75494 262 aaKnown RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 ACAA1P09110 424 aaPredicted RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 OR13C7P0DN81 318 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 B4GALT1P15291 398 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 HIST1H1DP16402 221 aaKnown RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 FSTP19883 344 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 MTCP1P56278 107 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 DSCR4P56555 118 aaPredicted RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 RPS16P62249 146 aaKnown RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 SLC30A7Q8NEW0 376 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 RTBDNQ9BSG5 229 aaPredicted RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 PAPOLGQ9BWT3 736 aaKnown RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 MMP26Q9NRE1 261 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 COA4Q9NYJ1 87 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 RCC2Q9P258 522 aaKnown RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 FGF16O43320 207 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 ZIC3O60481 467 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 MTRF1O75570 445 aaKnown RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 CD79AP11912 226 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 PDZD11Q5EBL8 140 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 DNM1P34Q6PK57 102 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 UQCC3Q6UW78 93 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 OR11L1Q8NGX0 322 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 LILRB1Q8NHL6 650 aaPredicted RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 RNF133Q8WVZ7 376 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 MRPL13Q9BYD1 178 aaKnown RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 SLC2A8Q9NY64 477 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 GPR132Q9UNW8 380 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 PRSS44E7EML9 344 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 SFT2D2O95562 160 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 NQO2P16083 231 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 ZNF14P17017 642 aaPredicted RBP9.67□□□□□ -0.86
LINC00661-204ENST00000549354 ZNF17P17021 662 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 FCGR2CP31995 323 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 PSMF1Q92530 271 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 FBXL17Q9UF56 701 aa9.67□□□□□ -0.86
LINC00661-204ENST00000549354 A0A1W2PPH5 198 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 K7EPK0 472 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 TNFSF11O14788 317 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 BPNT1O95861 308 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 MMP16P51512 607 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 QRFPP83859 136 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 KISS1Q15726 138 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 IZUMO4Q1ZYL8 232 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 DHRS7BQ6IAN0 325 aaPredicted RBP9.66□□□□□ -0.86
LINC00661-204ENST00000549354 FAM71E2Q8N5Q1 922 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 FAM24BQ8N5W8 94 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 PIGCQ92535 297 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 ERGIC1Q969X5 290 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 P4HTMQ9NXG6 502 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 USF3Q68DE3 2245 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 OR7C1O76099 320 aaPredicted RBP9.66□□□□□ -0.86
LINC00661-204ENST00000549354 IGHG1P01857 330 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 EPHA1P21709 976 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 RPL12P30050 165 aaKnown RBP9.66□□□□□ -0.86
LINC00661-204ENST00000549354 OTX2P32243 289 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 CAV2P51636 162 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 TMEM33P57088 247 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 H3F3AP84243 136 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 PIGYQ3MUY2 71 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 PHYHD1Q5SRE7 291 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 TMEM164Q5U3C3 297 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 ZNF468Q5VIY5 522 aaPredicted RBP9.66□□□□□ -0.86
LINC00661-204ENST00000549354 PRSS54Q6PEW0 395 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 ADAMTS17Q8TE56 1095 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 MRPL24Q96A35 216 aaKnown RBP9.66□□□□□ -0.86
LINC00661-204ENST00000549354 KIRREL1Q96J84 757 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms