RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 Q8IYB0 196 aa15.21■□□□□ 0.03
CHMP1A-203ENST00000547614 BATF2Q8N1L9 274 aa15.21■□□□□ 0.03
CHMP1A-203ENST00000547614 OR4M1Q8NGD0 313 aa15.21■□□□□ 0.03
CHMP1A-203ENST00000547614 ADAT3Q96EY9 351 aaPredicted RBP15.21■□□□□ 0.03
CHMP1A-203ENST00000547614 MBOAT4Q96T53 435 aa15.21■□□□□ 0.03
CHMP1A-203ENST00000547614 RNF114Q9Y508 228 aa15.21■□□□□ 0.03
CHMP1A-203ENST00000547614 F8VVB4 439 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 F8VWA3 439 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 EBAG9O00559 213 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 ZNF737O75373 536 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 HTR1AP08908 422 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 PRKACBP22694 351 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 NANOS3P60323 173 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 COL10A1Q03692 680 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 AANATQ16613 207 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 ASCC1Q8N9N2 400 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 RHOXF1Q8NHV9 184 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 SLAMF9Q96A28 289 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 LGALS12Q96DT0 336 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 Q96MT0 163 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 CITED1Q99966 193 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 MEGF9Q9H1U4 602 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 C16orf95Q9H693 158 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 S100A14Q9HCY8 104 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 HHLA2Q9UM44 414 aa15.2■□□□□ 0.02
CHMP1A-203ENST00000547614 IGKV1-9A0A0C4DH69 117 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 TSPAN9O75954 239 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 CLPXO76031 633 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 CYB5AP00167 134 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 RPSAP08865 295 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 ERVFRD-1P60508 538 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 GALEQ14376 348 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 DHRS7BQ6IAN0 325 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 ZBTB49Q6ZSB9 765 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 Q6ZSV7 163 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 ENTHD1Q8IYW4 607 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 SPSB1Q96BD6 273 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 FGGYQ96C11 551 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 PELI1Q96FA3 418 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 AJUBAQ96IF1 538 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 SNX22Q96L94 193 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 SLC29A1Q99808 456 aa15.19■□□□□ 0.02
CHMP1A-203ENST00000547614 OR4C45A6NMZ5 311 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 C17orf98A8MV24 154 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 J3QLW9 94 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 FADS2O95864 444 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 RBP4P02753 201 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 DBTP11182 482 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 CCL3L1P16619 93 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 ZNF19P17023 458 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 ZNF20P17024 532 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 ATF1P18846 271 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 AZGP1P25311 298 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 DLX6P56179 175 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 MTCP1P56278 107 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 PROK1P58294 105 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 ZNF91Q05481 1191 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 MEF2CQ06413 473 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 ZNF273Q14593 569 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 TREML4Q6UXN2 200 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 LHFPL2Q6ZUX7 228 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 GDPD3Q7L5L3 318 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 OR8H2Q8N162 312 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 SYS1Q8N2H4 156 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 PQLC1Q8N2U9 271 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 C4orf36Q96KX1 117 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 SSX3Q99909 188 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 AASSQ9UDR5 926 aa15.18■□□□□ 0.02
CHMP1A-203ENST00000547614 TRBV2A0A0J9YWF9 115 aa15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 LOC100130705A0A1B0GUX0 176 aa15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 IGHA1P01876 353 aa15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 MT-ND2P03891 347 aa15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 SRSF4Q08170 494 aaKnown RBP15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 ALKBH1Q13686 389 aaKnown RBP15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 ZNF146Q15072 292 aa15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 BRICD5Q6PL45 260 aa15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 LHFPL3Q86UP9 236 aa15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 C17orf50Q8WW18 174 aa15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 EMG1Q92979 244 aaKnown RBP15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 INPP5EQ9NRR6 644 aa15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 MRPS18AQ9NVS2 196 aaKnown RBP15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 FAM118AQ9NWS6 357 aa15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 TRRAPQ9Y4A5 3859 aa15.17■□□□□ 0.02
CHMP1A-203ENST00000547614 H3BUX3 64 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 INMTO95050 263 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 ZNF728P0DKX0 622 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 PIPP12273 146 aaPredicted RBP15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 NPBWR2P48146 333 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 LGALS4P56470 323 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 EDDM3BP56851 147 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 RAB40BQ12829 278 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 MRPL28Q13084 256 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 PDZK1IP1Q13113 114 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 LRRC75BQ2VPJ9 315 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 SPIN3Q5JUX0 258 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 FAM58AQ8N1B3 248 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 ZNF676Q8N7Q3 588 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 OPALINQ96PE5 141 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 ALG8Q9BVK2 526 aa15.16■□□□□ 0.02
CHMP1A-203ENST00000547614 MYRFQ9Y2G1 1151 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms