RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 POLDIP2Q9Y2S7 368 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 LYVE1Q9Y5Y7 322 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 SACSQ9NZJ4 4579 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 hADV38S2A0JD32 116 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 PQLC2LA1A4F0 135 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 GSC2O15499 205 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 SELENOFO60613 162 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 MMP23AO75900 390 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 NRASP01111 189 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 ATP6V1B1P15313 513 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 ZNF3P17036 446 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 CHATP28329 748 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 SLC6A1P30531 599 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 OR3A4PP47883 348 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 HMGA2P52926 109 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 EDDM3AQ14507 147 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 ZNF684Q5T5D7 378 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 BAIAP2L2Q6UXY1 529 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 ANGPTL5Q86XS5 388 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 OR8H2Q8N162 312 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 TPRX1Q8N7U7 411 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 OR51E1Q8TCB6 317 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 RAX2Q96IS3 184 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 NOL4LQ96MY1 436 aaPredicted RBP10.07□□□□□ -0.8
SCAF11-208ENST00000546534 IL1RAPQ9NPH3 570 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 ZFP57Q9NU63 452 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 FAM206AQ9NX38 181 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 LINC00312Q9Y6C7 94 aa10.07□□□□□ -0.8
SCAF11-208ENST00000546534 TMEM82A0PJX8 343 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 KRT36O76013 467 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 H2AFXP16104 143 aaPredicted RBP10.06□□□□□ -0.8
SCAF11-208ENST00000546534 MPZP25189 248 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 ECI1P42126 302 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 GP2P55259 537 aaKnown RBP10.06□□□□□ -0.8
SCAF11-208ENST00000546534 RAB25P57735 213 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 BDH1Q02338 343 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 PLBD1Q6P4A8 553 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 ZBTB49Q6ZSB9 765 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 ASRGL1Q7L266 308 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 KRT77Q7Z794 578 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 ZNF695Q8IW36 515 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 ABHD12Q8N2K0 398 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 ITFG2Q969R8 447 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 RCHY1Q96PM5 261 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 TEAD3Q99594 435 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 MYLK2Q9H1R3 596 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 OR51V1Q9H2C8 321 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 PALMDQ9NP74 551 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 GPR84Q9NQS5 396 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 GPR173Q9NS66 373 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 ENPP5Q9UJA9 477 aa10.06□□□□□ -0.8
SCAF11-208ENST00000546534 TMEM269A0A1B0GVZ9 245 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 ACOD1A6NK06 481 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 F8VVB4 439 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 F8VWA3 439 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 M0QZK8 103 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 CCL24O00175 119 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 PSMD9O00233 223 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 TNFRSF11BO00300 401 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 EIF4EBP3O60516 100 aaPredicted RBP10.05□□□□□ -0.8
SCAF11-208ENST00000546534 CCNB2O95067 398 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 IGLV3-1P01715 115 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 ARHGDIBP52566 201 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 PPP1R8Q12972 351 aaKnown RBP10.05□□□□□ -0.8
SCAF11-208ENST00000546534 SNAPC1Q16533 368 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 CLVS2Q5SYC1 327 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 C9orf66Q5T8R8 295 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 LCN1P1Q5VSP4 162 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 AQP11Q8NBQ7 271 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 OR52N4Q8NGI2 321 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 CHPT1Q8WUD6 406 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 SNX22Q96L94 193 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 PBOV1Q9GZY1 135 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 SPAG4Q9NPE6 437 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 PAPOLBQ9NRJ5 636 aaKnown RBP10.05□□□□□ -0.8
SCAF11-208ENST00000546534 SCOCQ9UIL1 159 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 LINC00527Q9UJ94 153 aa10.05□□□□□ -0.8
SCAF11-208ENST00000546534 LEUTXA8MZ59 168 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 FAM229AH3BQW9 127 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 IGLV1-47P01700 117 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 IGHA1P01876 353 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 ALOX5APP20292 161 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 HCCSP53701 268 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 CBX1P83916 185 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 IL24Q13007 206 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 PRAMEF5Q5TYX0 476 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 TMEM42Q69YG0 159 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 SBSPONQ8IVN8 264 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 IQCF1Q8N6M8 205 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 CDRT15Q96T59 188 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 MAGEL2Q9UJ55 1249 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 MOB4Q9Y3A3 225 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 HSPE1-MOB4S4R3N1 261 aa10.04□□□□□ -0.8
SCAF11-208ENST00000546534 DSCAML1Q8TD84 2053 aa10.03□□□□□ -0.8
SCAF11-208ENST00000546534 FAM172BPA6NC97 362 aa10.03□□□□□ -0.8
SCAF11-208ENST00000546534 ARRDC5A6NEK1 342 aa10.03□□□□□ -0.8
SCAF11-208ENST00000546534 DLGAP1O14490 977 aa10.03□□□□□ -0.8
SCAF11-208ENST00000546534 DHRS3O75911 302 aa10.03□□□□□ -0.8
SCAF11-208ENST00000546534 INMTO95050 263 aa10.03□□□□□ -0.8
SCAF11-208ENST00000546534 GRK1Q15835 563 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms