RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ENPP6Q6UWR7 440 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 GRAMD2AQ8IUY3 354 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 C15orf56Q8N910 161 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 OR6K3Q8NGY3 331 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 OR5W2Q8NH69 310 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 FNDC9Q8TBE3 224 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 ZNF418Q8TF45 676 aaPredicted RBP2.06□□□□□ -2.08
SNHG1-224ENST00000545688 MS4A6EQ96DS6 147 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 PPP1R2P1Q96PQ5 205 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 DHRS9Q9BPW9 319 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 BPESC1Q9GZL8 116 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 OR8D2Q9GZM6 311 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 RACGAP1Q9H0H5 632 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 METTL17Q9H7H0 456 aaPredicted RBP2.06□□□□□ -2.08
SNHG1-224ENST00000545688 PDP1Q9P0J1 537 aaPredicted RBP2.06□□□□□ -2.08
SNHG1-224ENST00000545688 GNG12Q9UBI6 72 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 ATP6V1DQ9Y5K8 247 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 HERC1Q15751 4861 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 KIAA1109Q2LD37 5005 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 STAB2Q8WWQ8 2551 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 DYNC1H1Q14204 4646 aaKnown RBP2.05□□□□□ -2.08
SNHG1-224ENST00000545688 ABCA13Q86UQ4 5058 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 SLC22A20A6NK97 555 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 CLDN34H7C241 214 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 APOC4-APOC2K7ER74 178 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 PSMD12O00232 456 aaPredicted RBP2.05□□□□□ -2.08
SNHG1-224ENST00000545688 TP53I11O14683 189 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 SLC31A2O15432 143 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 CLOCKO15516 846 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 OR1F1O43749 312 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 LRATO95237 230 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 MPZL1O95297 269 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 APOC2P02655 101 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 PTNP21246 168 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 PCMT1P22061 227 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 DEKP35659 375 aaKnown RBP2.05□□□□□ -2.08
SNHG1-224ENST00000545688 SRP14P37108 136 aaKnown RBP2.05□□□□□ -2.08
SNHG1-224ENST00000545688 SLC1A1P43005 524 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 PLA2G16P53816 162 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 DYNLT1P63172 113 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 BTN3A2P78410 334 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 BIKQ13323 160 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 PRPSAP1Q14558 356 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 SGCAQ16586 387 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 PTRHD1Q6GMV3 140 aaKnown RBP2.05□□□□□ -2.08
SNHG1-224ENST00000545688 AGTRAPQ6RW13 159 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 ANGPTL8Q6UXH0 198 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 SSX8Q7RTT4 187 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 MUC15Q8N387 334 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 PRELID2Q8N945 189 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 GPATCH11Q8N954 259 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 CNEP1R1Q8N9A8 125 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 FADS6Q8N9I5 356 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 SNX31Q8N9S9 440 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 BBOF1Q8ND07 529 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 STEAP2Q8NFT2 490 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 OR1J4Q8NGS1 313 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 ACTL9Q8TC94 416 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 ACTRT1Q8TDG2 376 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 CD300LFQ8TDQ1 290 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 S100PBPQ96BU1 408 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 DTNBP1Q96EV8 351 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 ITCHQ96J02 903 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 JSRP1Q96MG2 331 aaPredicted RBP2.05□□□□□ -2.08
SNHG1-224ENST00000545688 ZNF416Q9BWM5 594 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 LRRC40Q9H9A6 602 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 LYRM4Q9HD34 91 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 MYOZ1Q9NP98 299 aaPredicted RBP2.05□□□□□ -2.08
SNHG1-224ENST00000545688 SLCO1B3Q9NPD5 702 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 FAIMQ9NVQ4 179 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 AK6Q9Y3D8 172 aaKnown RBP2.05□□□□□ -2.08
SNHG1-224ENST00000545688 BZW2Q9Y6E2 419 aaKnown RBP2.05□□□□□ -2.08
SNHG1-224ENST00000545688 DNAH10Q8IVF4 4471 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 CSMD3Q7Z407 3707 aa2.05□□□□□ -2.08
SNHG1-224ENST00000545688 IGLV3-32A0A0A0MS00 114 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 LRP5LA4QPB2 252 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 C12orf71A8MTZ7 269 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 BTNL10A8MVZ5 291 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 B4DSR2 109 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 C12orf77C9JDV5 145 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 PIN1P1O15428 100 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 PSTPIP1O43586 416 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 IFNA16P05015 189 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 ADRA2AP08913 450 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 COX5AP20674 150 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 OMGP23515 440 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 PRTN3P24158 256 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 CD34P28906 385 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 RPL22P35268 128 aaKnown RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 SSR1P43307 286 aaKnown RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 HADHBP55084 474 aaKnown RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 STXBP1P61764 594 aaKnown RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 CDH17Q12864 832 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 SCGB2A2Q13296 93 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 PON3Q15166 354 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 TPD52L1Q16890 204 aaPredicted RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 EXOC3L2Q2M3D2 409 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 SAMD4BQ5PRF9 694 aaKnown RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 DUPD1Q68J44 220 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 LCN12Q6JVE5 192 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms