RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 OR6C70A6NIJ9 312 aa2.56□□□□□ -2
COPA-206ENST00000545266 MYL12BO14950 172 aa2.56□□□□□ -2
COPA-206ENST00000545266 CNMDO75829 334 aa2.56□□□□□ -2
COPA-206ENST00000545266 VAPBO95292 243 aa2.56□□□□□ -2
COPA-206ENST00000545266 CST4P01036 141 aa2.56□□□□□ -2
COPA-206ENST00000545266 UBE2G2P60604 165 aa2.56□□□□□ -2
COPA-206ENST00000545266 GNA13Q14344 377 aa2.56□□□□□ -2
COPA-206ENST00000545266 APOBEC3HQ6NTF7 200 aaKnown RBP2.56□□□□□ -2
COPA-206ENST00000545266 BBS7Q8IWZ6 715 aa2.56□□□□□ -2
COPA-206ENST00000545266 KRT222Q8N1A0 295 aa2.56□□□□□ -2
COPA-206ENST00000545266 OR2M7Q8NG81 312 aa2.56□□□□□ -2
COPA-206ENST00000545266 TFGQ92734 400 aaPredicted RBP2.56□□□□□ -2
COPA-206ENST00000545266 RNF170Q96K19 258 aa2.56□□□□□ -2
COPA-206ENST00000545266 SHANK2-AS3Q9BTD1 123 aa2.56□□□□□ -2
COPA-206ENST00000545266 MS4A8Q9BY19 250 aa2.56□□□□□ -2
COPA-206ENST00000545266 CHRNA10Q9GZZ6 450 aa2.56□□□□□ -2
COPA-206ENST00000545266 NSRP1Q9H0G5 558 aaKnown RBP2.56□□□□□ -2
COPA-206ENST00000545266 KIR3DX1Q9H7L2 352 aa2.56□□□□□ -2
COPA-206ENST00000545266 NKIRAS1Q9NYS0 192 aa2.56□□□□□ -2
COPA-206ENST00000545266 ZSWIM8A7E2V4 1837 aa2.56□□□□□ -2
COPA-206ENST00000545266 CLDN34H7C241 214 aa2.55□□□□□ -2
COPA-206ENST00000545266 POLR3AO14802 1390 aaPredicted RBP2.55□□□□□ -2
COPA-206ENST00000545266 ZMPSTE24O75844 475 aa2.55□□□□□ -2
COPA-206ENST00000545266 SC5DO75845 299 aa2.55□□□□□ -2
COPA-206ENST00000545266 IGHV1-46P01743 117 aa2.55□□□□□ -2
COPA-206ENST00000545266 RD3LP0DJH9 198 aa2.55□□□□□ -2
COPA-206ENST00000545266 S100A5P33763 92 aa2.55□□□□□ -2
COPA-206ENST00000545266 CSKP41240 450 aa2.55□□□□□ -2
COPA-206ENST00000545266 MEF2BQ02080 365 aaPredicted RBP2.55□□□□□ -2
COPA-206ENST00000545266 MEF2CQ06413 473 aaPredicted RBP2.55□□□□□ -2
COPA-206ENST00000545266 TNXAQ16473 311 aa2.55□□□□□ -2
COPA-206ENST00000545266 SPIN3Q5JUX0 258 aa2.55□□□□□ -2
COPA-206ENST00000545266 CDKL4Q5MAI5 379 aa2.55□□□□□ -2
COPA-206ENST00000545266 THADAQ6YHU6 1953 aa2.55□□□□□ -2
COPA-206ENST00000545266 OR2W3Q7Z3T1 314 aa2.55□□□□□ -2
COPA-206ENST00000545266 PLCZ1Q86YW0 608 aa2.55□□□□□ -2
COPA-206ENST00000545266 SYS1Q8N2H4 156 aa2.55□□□□□ -2
COPA-206ENST00000545266 BAALCQ8WXS3 180 aa2.55□□□□□ -2
COPA-206ENST00000545266 SEC22CQ9BRL7 303 aa2.55□□□□□ -2
COPA-206ENST00000545266 ZNF649Q9BS31 505 aa2.55□□□□□ -2
COPA-206ENST00000545266 POTEKPQ9BYX7 375 aa2.55□□□□□ -2
COPA-206ENST00000545266 UCK1Q9HA47 277 aa2.55□□□□□ -2
COPA-206ENST00000545266 ZNF391Q9UJN7 358 aa2.55□□□□□ -2
COPA-206ENST00000545266 NXT1Q9UKK6 140 aaKnown RBP2.55□□□□□ -2
COPA-206ENST00000545266 PSMD13Q9UNM6 376 aa2.55□□□□□ -2
COPA-206ENST00000545266 PUS1Q9Y606 427 aaKnown RBP eCLIP2.55□□□□□ -2
COPA-206ENST00000545266 URGCP-MRPS24S4R325 110 aa2.55□□□□□ -2
COPA-206ENST00000545266 LOXHD1Q8IVV2 1947 aa2.54□□□□□ -2
COPA-206ENST00000545266 LRPPRCP42704 1394 aaKnown RBP2.54□□□□□ -2
COPA-206ENST00000545266 IGHV2OR16-5A0A0B4J2B6 119 aa2.54□□□□□ -2
COPA-206ENST00000545266 A0A1W2PNN7 141 aa2.54□□□□□ -2
COPA-206ENST00000545266 RNASEK-C17orf49H0YIS7 233 aa2.54□□□□□ -2
COPA-206ENST00000545266 ITGB1BP1O14713 200 aa2.54□□□□□ -2
COPA-206ENST00000545266 ZW10O43264 779 aa2.54□□□□□ -2
COPA-206ENST00000545266 SLC35G6P0C7Q6 338 aa2.54□□□□□ -2
COPA-206ENST00000545266 LGALS3P17931 250 aaKnown RBP2.54□□□□□ -2
COPA-206ENST00000545266 IVDP26440 423 aa2.54□□□□□ -2
COPA-206ENST00000545266 ARL2P36404 184 aa2.54□□□□□ -2
COPA-206ENST00000545266 P2RY2P41231 377 aa2.54□□□□□ -2
COPA-206ENST00000545266 ITGB3BPQ13352 177 aaPredicted RBP2.54□□□□□ -2
COPA-206ENST00000545266 MAPRE2Q15555 327 aa2.54□□□□□ -2
COPA-206ENST00000545266 HHATQ5VTY9 493 aa2.54□□□□□ -2
COPA-206ENST00000545266 SLC35D2Q76EJ3 337 aa2.54□□□□□ -2
COPA-206ENST00000545266 KRTAP13-1Q8IUC0 172 aa2.54□□□□□ -2
COPA-206ENST00000545266 SGPP2Q8IWX5 399 aa2.54□□□□□ -2
COPA-206ENST00000545266 BOD1L2Q8IYS8 172 aa2.54□□□□□ -2
COPA-206ENST00000545266 ZCCHC24Q8N2G6 241 aaKnown RBP2.54□□□□□ -2
COPA-206ENST00000545266 CDRT4Q8N9R6 151 aa2.54□□□□□ -2
COPA-206ENST00000545266 TMEM234Q8WY98 164 aa2.54□□□□□ -2
COPA-206ENST00000545266 OR8D1Q8WZ84 308 aa2.54□□□□□ -2
COPA-206ENST00000545266 TM2D3Q9BRN9 247 aa2.54□□□□□ -2
COPA-206ENST00000545266 PARD6GQ9BYG4 376 aaPredicted RBP2.54□□□□□ -2
COPA-206ENST00000545266 PSTPIP2Q9H939 334 aa2.54□□□□□ -2
COPA-206ENST00000545266 OR2S2Q9NQN1 319 aa2.54□□□□□ -2
COPA-206ENST00000545266 IL20Q9NYY1 176 aa2.54□□□□□ -2
COPA-206ENST00000545266 KLF12Q9Y4X4 402 aa2.54□□□□□ -2
COPA-206ENST00000545266 AQRO60306 1485 aaKnown RBP eCLIP2.53□□□□□ -2
COPA-206ENST00000545266 NPHP4O75161 1426 aaPredicted RBP2.53□□□□□ -2
COPA-206ENST00000545266 ADCY9O60503 1353 aa2.53□□□□□ -2
COPA-206ENST00000545266 LOC102724200A0A096LPH7 203 aaPredicted RBP2.53□□□□□ -2
COPA-206ENST00000545266 CENPXA8MT69 81 aa2.53□□□□□ -2
COPA-206ENST00000545266 MKRN2OSH3BPM6 223 aa2.53□□□□□ -2
COPA-206ENST00000545266 MYO1DO94832 1006 aa2.53□□□□□ -2
COPA-206ENST00000545266 BGNP21810 368 aa2.53□□□□□ -2
COPA-206ENST00000545266 TEAD1P28347 426 aa2.53□□□□□ -2
COPA-206ENST00000545266 MAGEA6P43360 314 aa2.53□□□□□ -2
COPA-206ENST00000545266 MLF1P58340 268 aa2.53□□□□□ -2
COPA-206ENST00000545266 MTPNP58546 118 aa2.53□□□□□ -2
COPA-206ENST00000545266 SLC35A1P78382 337 aa2.53□□□□□ -2
COPA-206ENST00000545266 C2orf54Q08AI8 447 aa2.53□□□□□ -2
COPA-206ENST00000545266 KRTAP6-3Q3LI67 103 aa2.53□□□□□ -2
COPA-206ENST00000545266 ADM2Q7Z4H4 148 aa2.53□□□□□ -2
COPA-206ENST00000545266 DAZ4Q86SG3 579 aaKnown RBP2.53□□□□□ -2
COPA-206ENST00000545266 LGALS14Q8TCE9 139 aa2.53□□□□□ -2
COPA-206ENST00000545266 ING5Q8WYH8 240 aa2.53□□□□□ -2
COPA-206ENST00000545266 SERPINB11Q96P15 392 aa2.53□□□□□ -2
COPA-206ENST00000545266 GABRG3Q99928 467 aa2.53□□□□□ -2
COPA-206ENST00000545266 C7orf50Q9BRJ6 194 aaKnown RBP2.53□□□□□ -2
COPA-206ENST00000545266 UTP23Q9BRU9 249 aaKnown RBP2.53□□□□□ -2
COPA-206ENST00000545266 BEX2Q9BXY8 128 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms