RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 SLC36A1Q7Z2H8 476 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 CSNK2A3Q8NEV1 391 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 STEAP2Q8NFT2 490 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 OR11H4Q8NGC9 324 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 MARCH1Q8TCQ1 289 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 TM2D1Q9BX74 207 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 IGSF10Q6WRI0 2623 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 SPTBN1Q01082 2364 aaKnown RBP11.69□□□□□ -0.54
HCFC2-202ENST00000544223 MEX3AA1L020 520 aaKnown RBP11.68□□□□□ -0.54
HCFC2-202ENST00000544223 MRPS15P82914 257 aaKnown RBP11.68□□□□□ -0.54
HCFC2-202ENST00000544223 ZNF826PQ6ZT77 177 aa11.68□□□□□ -0.54
HCFC2-202ENST00000544223 FAM219AQ8IW50 185 aa11.68□□□□□ -0.54
HCFC2-202ENST00000544223 MAP1AP78559 2803 aaPredicted RBP11.68□□□□□ -0.54
HCFC2-202ENST00000544223 TMEM82A0PJX8 343 aa11.68□□□□□ -0.54
HCFC2-202ENST00000544223 OR5H1A6NKK0 313 aa11.68□□□□□ -0.54
HCFC2-202ENST00000544223 HS3ST1O14792 307 aa11.68□□□□□ -0.54
HCFC2-202ENST00000544223 GSTP1P09211 210 aaKnown RBP11.68□□□□□ -0.54
HCFC2-202ENST00000544223 ZNF35P13682 527 aa11.68□□□□□ -0.54
HCFC2-202ENST00000544223 CBR1P16152 277 aa11.68□□□□□ -0.54
HCFC2-202ENST00000544223 AKR1C4P17516 323 aa11.68□□□□□ -0.54
HCFC2-202ENST00000544223 TMPRSS3P57727 454 aa11.68□□□□□ -0.54
HCFC2-202ENST00000544223 NOXA1Q86UR1 476 aa11.68□□□□□ -0.54
HCFC2-202ENST00000544223 EMG1Q92979 244 aaKnown RBP11.68□□□□□ -0.54
HCFC2-202ENST00000544223 MARS2Q96GW9 593 aaKnown RBP11.68□□□□□ -0.54
HCFC2-202ENST00000544223 HIST1H2AAQ96QV6 131 aa11.68□□□□□ -0.54
HCFC2-202ENST00000544223 TRAV39A0A0B4J263 110 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 IGHV2OR16-5A0A0B4J2B6 119 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 CDIPTO14735 213 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 CST4P01036 141 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 PRKACAP17612 351 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 RBM11P57052 281 aaKnown RBP11.67□□□□□ -0.54
HCFC2-202ENST00000544223 SF3B4Q15427 424 aaKnown RBP eCLIP11.67□□□□□ -0.54
HCFC2-202ENST00000544223 DCAF12L2Q5VW00 463 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 CDH24Q86UP0 819 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 ZNF486Q96H40 463 aaPredicted RBP11.67□□□□□ -0.54
HCFC2-202ENST00000544223 LIME1Q9H400 295 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 MGAT4CQ9UBM8 478 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 GHRLQ9UBU3 117 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 DUSP13Q9UII6 198 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 F5H5P2 479 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 TPPPO94811 219 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 IFNA6P05013 189 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 CHATP28329 748 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 CEBPDP49716 269 aaPredicted RBP11.67□□□□□ -0.54
HCFC2-202ENST00000544223 TSPAN5P62079 268 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 IFITM2Q01629 132 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 KRTCAP3Q53RY4 240 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 ASCL4Q6XD76 172 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 CCDC54Q8NEL0 328 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 OR5L1Q8NGL2 311 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 ACTR6Q9GZN1 396 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 UFSP2Q9NUQ7 469 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 EHFQ9NZC4 300 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 SLC25A15Q9Y619 301 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 FLNCQ14315 2725 aa11.67□□□□□ -0.54
HCFC2-202ENST00000544223 A0A1B0GUH1 482 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 CCSO14618 274 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 MLNRO43193 412 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 MPPED2Q15777 294 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 SPRNQ5BIV9 151 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 OR13G1Q8NGZ3 307 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 ZNF442Q9H7R0 627 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 OBP2BQ9NPH6 170 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 FAM172BPA6NC97 362 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 PRRG2O14669 202 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 OR4E1P0C645 316 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 SULT1A3P0DMM9 295 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 SULT1A4P0DMN0 295 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 H2BFSP57053 126 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 MAB21L1Q13394 359 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 LY6DQ14210 128 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 METTL11BQ5VVY1 283 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 Q6ZR03 302 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 NLRC3Q7RTR2 1065 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 ZSCAN4Q8NAM6 433 aaPredicted RBP11.66□□□□□ -0.54
HCFC2-202ENST00000544223 UBALD1Q8TB05 177 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 CASTOR1Q8WTX7 329 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 RDH5Q92781 318 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 CMSS1Q9BQ75 279 aaKnown RBP11.66□□□□□ -0.54
HCFC2-202ENST00000544223 SLX1AQ9BQ83 275 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 OCSTAMPQ9BR26 566 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 ADAT1Q9BUB4 502 aaKnown RBP11.66□□□□□ -0.54
HCFC2-202ENST00000544223 WDR13Q9H1Z4 485 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 SCP2D1Q9UJQ7 156 aa11.66□□□□□ -0.54
HCFC2-202ENST00000544223 GOSR2O14653 212 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 WNT9BO14905 357 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 CREBL2O60519 120 aaPredicted RBP11.65□□□□□ -0.54
HCFC2-202ENST00000544223 TRAPPC2P0DI81 140 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 TRAPPC2BP0DI82 140 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 CCKARP32238 428 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 MRPL49Q13405 166 aaKnown RBP11.65□□□□□ -0.54
HCFC2-202ENST00000544223 IKZF1Q13422 519 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 PRAMEF6Q5VXH4 476 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 ZNF626Q68DY1 528 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 FBXW12Q6X9E4 464 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 FTMTQ8N4E7 242 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 SCCPDHQ8NBX0 429 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 PXT1Q8NFP0 134 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 OR5H2Q8NGV7 314 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms