RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 MPZL1O95297 269 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 ANKRD34CP0C6C1 535 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 TM4SF4P48230 202 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 TMEM33P57088 247 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 HIST3H3Q16695 136 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 MAP1LC3CQ9BXW4 147 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 CDRT15L2A8MXV6 281 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 PPIHO43447 177 aaKnown RBP13.76□□□□□ -0.21
CHD4-210ENST00000544040 CRYBA1P05813 215 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 OR1C1Q15619 314 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 SLC7A10Q9NS82 523 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 HSF4Q9ULV5 492 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 OR4C46A6NHA9 309 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 SEMA7AO75326 666 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 ZNF253O75346 499 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 AREGP15514 252 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 SUCLG1P53597 346 aaKnown RBP13.76□□□□□ -0.21
CHD4-210ENST00000544040 EIF4E3Q8N5X7 224 aaKnown RBP13.76□□□□□ -0.21
CHD4-210ENST00000544040 SPACA9Q96E40 222 aaPredicted RBP13.76□□□□□ -0.21
CHD4-210ENST00000544040 TSPAN32Q96QS1 320 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 Q9N2K0 584 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 PDE4DIPQ5VU43 2346 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 ASPDHA6ND91 283 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 K7ESF4 209 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 FXYD1O00168 92 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 ZFPL1O95159 310 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 CEACAM5P06731 702 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 DGAT2L7PQ6IED9 249 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 MRPL54Q6P161 138 aaKnown RBP13.75□□□□□ -0.21
CHD4-210ENST00000544040 WDR73Q6P4I2 378 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 TUSC5Q8IXB3 177 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 OR8A1Q8NGG7 326 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 NUBPLQ8TB37 319 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 MEGF10Q96KG7 1140 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 MTFP1Q9UDX5 166 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 MGPP08493 103 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 UBE2L3P68036 154 aaKnown RBP13.75□□□□□ -0.21
CHD4-210ENST00000544040 IGFBP7Q16270 282 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 NUFIP2Q7Z417 695 aaKnown RBP13.75□□□□□ -0.21
CHD4-210ENST00000544040 TRAF4Q9BUZ4 470 aaPredicted RBP13.75□□□□□ -0.21
CHD4-210ENST00000544040 MRPL37Q9BZE1 423 aaKnown RBP13.75□□□□□ -0.21
CHD4-210ENST00000544040 IGKV3-7A0A075B6H7 116 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 OR2T8A6NH00 312 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 FBLL1A6NHQ2 334 aaKnown RBP13.75□□□□□ -0.21
CHD4-210ENST00000544040 OR5B21A6NL26 309 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 TBX19O60806 448 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 PATE4P0C8F1 98 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 BMI1P35226 326 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 SSX1Q16384 188 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 SPSB1Q96BD6 273 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 ARRDC1-AS1Q9H2J1 176 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 NAT8Q9UHE5 227 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 SIGLEC7Q9Y286 467 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 INHBBP09529 407 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 TNXAQ16473 311 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 DHRS13Q6UX07 377 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 NEIL1Q96FI4 390 aaPredicted RBP13.75□□□□□ -0.21
CHD4-210ENST00000544040 TEX101Q9BY14 249 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 MYOZ1Q9NP98 299 aaPredicted RBP13.75□□□□□ -0.21
CHD4-210ENST00000544040 AMDHD2Q9Y303 409 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 LAMB4A4D0S4 1761 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 RAE1P78406 368 aaKnown RBP13.75□□□□□ -0.21
CHD4-210ENST00000544040 DLK1P80370 383 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 MPV17LQ2QL34 196 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 MUC15Q8N387 334 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 FUT9Q9Y231 359 aa13.75□□□□□ -0.21
CHD4-210ENST00000544040 A0A0B4J2E0 115 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 A0A1B0GX12 115 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 DHRS3O75911 302 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 FUT7Q11130 342 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 PRSS54Q6PEW0 395 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 PDPNQ86YL7 162 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 FAM117AQ9C073 453 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 SRSF9Q13242 221 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHD4-210ENST00000544040 RNF165Q6ZSG1 346 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 NT5CQ8TCD5 201 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 MCHR2Q969V1 340 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 SH2D2AQ9NP31 389 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 MMP25Q9NPA2 562 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 RPLP1P05386 114 aaKnown RBP13.74□□□□□ -0.21
CHD4-210ENST00000544040 GABRA1P14867 456 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 HES3Q5TGS1 186 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 WDR74Q6RFH5 385 aaPredicted RBP13.74□□□□□ -0.21
CHD4-210ENST00000544040 LIAT1Q6ZQX7 453 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 SLC36A1Q7Z2H8 476 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 ARL6IP6Q8N6S5 226 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 C17orf47Q8NEP4 570 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 OR2T10Q8NGZ9 312 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 LRRC29Q8WV35 223 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 D2HGDHQ8N465 521 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 ABHD3Q8WU67 409 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 TRGV5A0A0B4J1U4 118 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 LEUTXA8MZ59 168 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 PLPP2O43688 288 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 IGF2P01344 180 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 APELAP0DMC3 54 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 TNFRSF1AP19438 455 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 IL13RA2Q14627 380 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 TBC1D26Q86UD7 250 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 SPICQ8N5J4 248 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms