RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	SLC35D2	Q76EJ3	337 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	NKAIN4	Q8IVV8	208 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	RNF113B	Q8IZP6	322 aa	Known RBP	5.44	□□□□□ -1.54
CIT-213	ENST00000543324	SLC22A24	Q8N4F4	322 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	PAQR4	Q8N4S7	273 aa	Predicted RBP	5.44	□□□□□ -1.54
CIT-213	ENST00000543324	LRRC75A	Q8NAA5	344 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	DNAAF1	Q8NEP3	725 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	NOXO1	Q8NFA2	376 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	BEST4	Q8NFU0	473 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	OR4Q3	Q8NH05	313 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	COQ8A	Q8NI60	647 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	MUC7	Q8TAX7	377 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	ABHD4	Q8TB40	342 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	TMEM255B	Q8WV15	326 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	NEU4	Q8WWR8	484 aa	Predicted RBP	5.44	□□□□□ -1.54
CIT-213	ENST00000543324	ASB10	Q8WXI3	467 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	ST8SIA2	Q92186	375 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	NABP1	Q96AH0	204 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	FOXN4	Q96NZ1	517 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	MUC4	Q99102	2169 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	GPA33	Q99795	319 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	SEC22C	Q9BRL7	303 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	PIMREG	Q9BSJ6	248 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	ALG8	Q9BVK2	526 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	RERGL	Q9H628	205 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	EGLN3	Q9H6Z9	239 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	C20orf141	Q9NUB4	165 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	MYEF2	Q9P2K5	600 aa	Known RBP	5.44	□□□□□ -1.54
CIT-213	ENST00000543324	OPN4	Q9UHM6	478 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	HIF3A	Q9Y2N7	669 aa		5.44	□□□□□ -1.54
CIT-213	ENST00000543324	MRPS7	Q9Y2R9	242 aa	Known RBP	5.44	□□□□□ -1.54
CIT-213	ENST00000543324	CARHSP1	Q9Y2V2	147 aa	Known RBP	5.44	□□□□□ -1.54
CIT-213	ENST00000543324	DNAH10	Q8IVF4	4471 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	IGKV1D-43	A0A0B4J1Z2	117 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	UBE2QL1	A1L167	161 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	RFPL4A	A6NLU0	287 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	C11orf98	E9PRG8	122 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	RFPL4AL1	F8VTS6	287 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ARPC1B	O15143	372 aa	Known RBP	5.43	□□□□□ -1.54
CIT-213	ENST00000543324	OGG1	O15527	345 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	DHH	O43323	396 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	SYNGR3	O43761	229 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ARL6IP5	O75915	188 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ATG12	O94817	140 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	UCHL1	P09936	223 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	OR8G3P	P0DMU2	310 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ATF1	P18846	271 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	PAICS	P22234	425 aa	Known RBP	5.43	□□□□□ -1.54
CIT-213	ENST00000543324	IL2RG	P31785	369 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	SCAND1	P57086	179 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	RAB1A	P62820	205 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ACTC1	P68032	377 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ACTA1	P68133	377 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	MRPS34	P82930	218 aa	Known RBP	5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ST3GAL3	Q11203	375 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	PIN1	Q13526	163 aa	Predicted RBP	5.43	□□□□□ -1.54
CIT-213	ENST00000543324	MELK	Q14680	651 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	GUCA2B	Q16661	112 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	RPL13AP3	Q6NVV1	102 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	BRICD5	Q6PL45	260 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ALKAL2	Q6UX46	152 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	UNQ9370/PRO34162	Q6UXP9	181 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ZNF620	Q6ZNG0	422 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	C17orf107	Q6ZR85	190 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	SLC36A1	Q7Z2H8	476 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	DPPA2	Q7Z7J5	298 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ZCCHC24	Q8N2G6	241 aa	Known RBP	5.43	□□□□□ -1.54
CIT-213	ENST00000543324	SVBP	Q8N300	66 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	OR2AK2	Q8NG84	335 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	PFN4	Q8NHR9	129 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	FAM110D	Q8TAY7	271 aa	Predicted RBP	5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ZNF519	Q8TB69	540 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	RAB40A	Q8WXH6	277 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ACOT11	Q8WXI4	607 aa	Predicted RBP	5.43	□□□□□ -1.54
CIT-213	ENST00000543324	DDB2	Q92466	427 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	MCHR2	Q969V1	340 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	NARS2	Q96I59	477 aa	Known RBP	5.43	□□□□□ -1.54
CIT-213	ENST00000543324	PGLYRP3	Q96LB9	341 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	OCSTAMP	Q9BR26	566 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ZNF251	Q9BRH9	671 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ARL6	Q9H0F7	186 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	HINT3	Q9NQE9	182 aa	Known RBP	5.43	□□□□□ -1.54
CIT-213	ENST00000543324	HAO2	Q9NYQ3	351 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	H2AFY2	Q9P0M6	372 aa	Predicted RBP	5.43	□□□□□ -1.54
CIT-213	ENST00000543324	MBD2	Q9UBB5	411 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	MLX	Q9UH92	298 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	SLC13A4	Q9UKG4	626 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	MMP24	Q9Y5R2	645 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	SIRT4	Q9Y6E7	314 aa	Predicted RBP	5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ALMS1	Q8TCU4	4167 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	WNK2	Q9Y3S1	2297 aa		5.43	□□□□□ -1.54
CIT-213	ENST00000543324	ZNF726	A6NNF4	738 aa		5.42	□□□□□ -1.54
CIT-213	ENST00000543324		F5H5P2	479 aa		5.42	□□□□□ -1.54
CIT-213	ENST00000543324	SULT1C2	O00338	296 aa		5.42	□□□□□ -1.54
CIT-213	ENST00000543324	IMPA2	O14732	288 aa		5.42	□□□□□ -1.54
CIT-213	ENST00000543324	PIP5K1C	O60331	668 aa		5.42	□□□□□ -1.54
CIT-213	ENST00000543324	KHDRBS3	O75525	346 aa	Known RBP	5.42	□□□□□ -1.54
CIT-213	ENST00000543324	PLAT	P00750	562 aa		5.42	□□□□□ -1.54
CIT-213	ENST00000543324	IGHG1	P01857	330 aa		5.42	□□□□□ -1.54
CIT-213	ENST00000543324	QDPR	P09417	244 aa		5.42	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms