RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 LIN9Q5TKA1 542 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 BRD3OSQ6XYD6 125 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 CBR4Q8N4T8 237 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 CSGALNACT2Q8N6G5 542 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 OR5T1Q8NG75 326 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 OR9G4Q8NGQ1 327 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 DNAJB3Q8WWF6 145 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 TMEM243Q9BU79 118 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 CHCHD7Q9BUK0 85 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 ACTR3CQ9C0K3 210 aaPredicted RBP1.99□□□□□ -2.09
RAP1B-224ENST00000541216 SLIRPQ9GZT3 109 aaKnown RBP1.99□□□□□ -2.09
RAP1B-224ENST00000541216 C8orf33Q9H7E9 229 aaPredicted RBP1.99□□□□□ -2.09
RAP1B-224ENST00000541216 ASCL3Q9NQ33 180 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 GINS2Q9Y248 185 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 SIGLEC7Q9Y286 467 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 SPAG17Q6Q759 2223 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 MCM3APO60318 1980 aa1.99□□□□□ -2.09
RAP1B-224ENST00000541216 PARP14Q460N5 1801 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 PTPRBP23467 1997 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 C2orf16Q68DN1 1984 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 PCDH15Q96QU1 1955 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 COL4A2P08572 1712 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 IGHV3OR16-9A0A0B4J2B5 98 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 IGHV1-3A0A0C4DH29 117 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 M0QZ92 97 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 SLC9A3R1O14745 358 aaPredicted RBP1.98□□□□□ -2.09
RAP1B-224ENST00000541216 EIF1BO60739 113 aaKnown RBP1.98□□□□□ -2.09
RAP1B-224ENST00000541216 HUS1O60921 280 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 CYB5R3P00387 301 aaPredicted RBP1.98□□□□□ -2.09
RAP1B-224ENST00000541216 PAHP00439 452 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 OXTP01178 125 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 PGA5P0DJD9 388 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 MYL2P10916 166 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 CTRB1P17538 263 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 ADORA1P30542 326 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 EIF1P41567 113 aaKnown RBP1.98□□□□□ -2.09
RAP1B-224ENST00000541216 MRPL19P49406 292 aaKnown RBP1.98□□□□□ -2.09
RAP1B-224ENST00000541216 DYNLL1P63167 89 aaKnown RBP1.98□□□□□ -2.09
RAP1B-224ENST00000541216 ZNF33AQ06730 810 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 PPIDQ08752 370 aaKnown RBP1.98□□□□□ -2.09
RAP1B-224ENST00000541216 IL15RAQ13261 267 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 PNOCQ13519 176 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 GCSAMLQ5JQS6 135 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 CARD17Q5XLA6 110 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 TTC23LQ6PF05 361 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 SPINT4Q6UDR6 99 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 ZNF645Q8N7E2 425 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 OR1J4Q8NGS1 313 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 C8orf44Q96CB5 159 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 WDR34Q96EX3 536 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 BTN2A3PQ96KV6 586 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 CFAP53Q96M91 514 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 PLA2G12AQ9BZM1 189 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 TMEM185BQ9H7F4 350 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 ZNF160Q9HCG1 818 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 MYOZ1Q9NP98 299 aaPredicted RBP1.98□□□□□ -2.09
RAP1B-224ENST00000541216 ACP6Q9NPH0 428 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 AGPAT4Q9NRZ5 378 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 RGS18Q9NS28 235 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 CLN6Q9NWW5 311 aa1.98□□□□□ -2.09
RAP1B-224ENST00000541216 ZNF469Q96JG9 3925 aaPredicted RBP1.98□□□□□ -2.09
RAP1B-224ENST00000541216 CCDC171Q6TFL3 1326 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 SVEP1Q4LDE5 3571 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 A0A1B0GUH1 482 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 GABRPO00591 440 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 TAAR5O14804 337 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 LSM1O15116 133 aaKnown RBP1.97□□□□□ -2.09
RAP1B-224ENST00000541216 SHOX2O60902 331 aaPredicted RBP1.97□□□□□ -2.09
RAP1B-224ENST00000541216 WBP4O75554 376 aaKnown RBP1.97□□□□□ -2.09
RAP1B-224ENST00000541216 SERPINB7O75635 380 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 KRT14P02533 472 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 P0C880 135 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 PGA4P0DJD7 388 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 PGA3P0DJD8 388 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 COX6B1P14854 86 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 USF1P22415 310 aaPredicted RBP1.97□□□□□ -2.09
RAP1B-224ENST00000541216 DEFA6Q01524 100 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 MEF2BQ02080 365 aaPredicted RBP1.97□□□□□ -2.09
RAP1B-224ENST00000541216 ART3Q13508 389 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 FAM53BQ14153 422 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 YIF1BQ5BJH7 314 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 TMEM220Q6QAJ8 160 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 C16orf47Q6ZP98 133 aaPredicted RBP1.97□□□□□ -2.09
RAP1B-224ENST00000541216 OR5M1Q8NGP8 315 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 OR1P1Q8NH06 330 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 TCEAL4Q96EI5 215 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 ZFP3Q96NJ6 502 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 XPO6Q96QU8 1125 aaKnown RBP1.97□□□□□ -2.09
RAP1B-224ENST00000541216 PANX1Q96RD7 426 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 PLIN2Q99541 437 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 FRMD8P1Q9BZ68 369 aaPredicted RBP1.97□□□□□ -2.09
RAP1B-224ENST00000541216 BEX1Q9HBH7 125 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 NEK6Q9HC98 313 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 RHBDL2Q9NX52 303 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 MAP1AP78559 2803 aaPredicted RBP1.97□□□□□ -2.09
RAP1B-224ENST00000541216 MYH3P11055 1940 aa1.97□□□□□ -2.09
RAP1B-224ENST00000541216 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.96□□□□□ -2.13e-7■■■□□ 17.3
RAP1B-224ENST00000541216 ABCB11O95342 1321 aa1.96□□□□□ -2.1
RAP1B-224ENST00000541216 SONP18583 2426 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms