RNA–Protein interactions for RNA: ENST00000541152.6

SEPT9-208, Transcript of septin 9, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEPT9, Length 3,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-208	ENST00000541152	TMEM217	Q8N7C4	229 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	OR1L3	Q8NH93	324 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	ZNF160	Q9HCG1	818 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	NSG1	A0A0A6YYJ2	146 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	FAM230A	A0A1W2PPH8	454 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	CYB5B	O43169	146 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	PHF1	O43189	567 aa	Predicted RBP	13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	IGHG1	P01857	330 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	CTSD	P07339	412 aa	Predicted RBP	13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	ZNF728	P0DKX0	622 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	PMEL	P40967	661 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	CDX1	P47902	265 aa	Predicted RBP	13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	ERVFRD-1	P60508	538 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	SMAD4	Q13485	552 aa	Known RBP	13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	GPR173	Q9NS66	373 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	KLHL13	Q9P2N7	655 aa		13.18	□□□□□ -0.3
SEPT9-208	ENST00000541152	CCDC187	A0A096LP49	1063 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	TRGC2	P03986	189 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	HEXB	P07686	556 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	MDK	P21741	143 aa	Predicted RBP	13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	SLC38A9	Q8NBW4	561 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	GINS3	Q9BRX5	216 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	CHST5	Q9GZS9	411 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	SERPINE3	A8MV23	424 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	GPR137B	O60478	399 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	PGA4	P0DJD7	388 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	PGA3	P0DJD8	388 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	FOLR1	P15328	257 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	AFF3	P51826	1226 aa	Known RBP	13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	C17orf67	Q0P5P2	114 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	OR2AE1	Q8NHA4	323 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	NTNG2	Q96CW9	530 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	MUCL1	Q96DR8	90 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	TPSD1	Q9BZJ3	242 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	TGIF2	Q9GZN2	237 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	PNRC2	Q9NPJ4	139 aa	Known RBP	13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	TREM2	Q9NZC2	230 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	HS3ST3B1	Q9Y662	390 aa		13.17	□□□□□ -0.3
SEPT9-208	ENST00000541152	TLCD2	A6NGC4	264 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	CST7	O76096	145 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	RND3	P61587	244 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	DLK1	P80370	383 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	RUNX1	Q01196	453 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	SURF2	Q15527	256 aa	Predicted RBP	13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	C21orf62-AS1	Q17RA5	79 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	NOXO1	Q8NFA2	376 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	HPSE2	Q8WWQ2	592 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	AK3	Q9UIJ7	227 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	ADAMTS9	Q9P2N4	1935 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	RBFOX3	A6NFN3	312 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	ST8SIA3	O43173	380 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	SOD3	P08294	240 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	CSNK1A1	P48729	337 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	MTCP1	P56278	107 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	OR1D5	P58170	312 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	GAMT	Q14353	236 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	TMEM187	Q14656	261 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	CYB561D1	Q8N8Q1	229 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	OIT3	Q8WWZ8	545 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	FBRS	Q9HAH7	460 aa		13.16	□□□□□ -0.3
SEPT9-208	ENST00000541152	ANKUB1	A6NFN9	424 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	FABP4	P15090	132 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	PNLIP	P16233	465 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	ZNF43	P17038	809 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	ATP6V0C	P27449	155 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	BLK	P51451	505 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152		Q6ZS52	159 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	COMMD1	Q8N668	190 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	CCDC54	Q8NEL0	328 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	MALSU1	Q96EH3	234 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	ARV1	Q9H2C2	271 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	NAA60	Q9H7X0	242 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	SLC2A9	Q9NRM0	540 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	SLC7A11	Q9UPY5	501 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	ZNF726	A6NNF4	738 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	HIST1H2BK	O60814	126 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	HIST1H2BJ	P06899	126 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	HIST1H2BO	P23527	126 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	HIST1H2BB	P33778	126 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	HIST1H2BD	P58876	126 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	HIST1H2BC	P62807	126 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	HIST2H2BE	Q16778	126 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	FAM69B	Q5VUD6	431 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	ZNF610	Q8N9Z0	462 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	HIST1H2BH	Q93079	126 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	HIST1H2BN	Q99877	126 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	HIST1H2BM	Q99879	126 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	ALKBH4	Q9NXW9	302 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	LRP4	O75096	1905 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	FER1L5	A0AVI2	2057 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	IGHV3-15	A0A0B4J1V0	119 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	ZNF41	P51814	821 aa	Predicted RBP	13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	UCP2	P55851	309 aa		13.15	□□□□□ -0.3
SEPT9-208	ENST00000541152	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.15	□□□□□ -0.3	4e-6	■■■□□ 19.2
SEPT9-208	ENST00000541152	ELOB	Q15370	118 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms