RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 M0R1W7 72 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 SLC1A7O00341 560 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 SULT1B1O43704 296 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 CYB5AP00167 134 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 LALBAP00709 142 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 NDUFB7P17568 137 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 TAS2R43P59537 309 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 ARF6P62330 175 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 PDZK1IP1Q13113 114 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 RIPK1Q13546 671 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 RNLSQ5VYX0 342 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 DMKNQ6E0U4 476 aaPredicted RBP10.79□□□□□ -0.68
LTBR-208ENST00000541005 ASPHD2Q6ICH7 369 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 AHSA2Q719I0 299 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 SAXO1Q8IYX7 474 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 CMTM4Q8IZR5 234 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 BCL6BQ8N143 479 aaPredicted RBP10.79□□□□□ -0.68
LTBR-208ENST00000541005 ZDHHC22Q8N966 263 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 GPR148Q8TDV2 347 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 TSEN15Q8WW01 171 aaKnown RBP10.79□□□□□ -0.68
LTBR-208ENST00000541005 C22orf15Q8WYQ4 148 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 SLAMF9Q96A28 289 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 ZNF48Q96MX3 618 aaPredicted RBP10.79□□□□□ -0.68
LTBR-208ENST00000541005 MS4A7Q9GZW8 240 aaPredicted RBP10.79□□□□□ -0.68
LTBR-208ENST00000541005 PRDM13Q9H4Q3 707 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 UNKLQ9H9P5 680 aaKnown RBP10.79□□□□□ -0.68
LTBR-208ENST00000541005 ZMAT3Q9HA38 289 aaKnown RBP10.79□□□□□ -0.68
LTBR-208ENST00000541005 RHOFQ9HBH0 211 aa10.79□□□□□ -0.68
LTBR-208ENST00000541005 IGHV3OR16-10A0A075B7F0 116 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 TRBV5-5A0A0J9YX44 114 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 CENPVL3A0A0U1RRI6 287 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 CLDN34H7C241 214 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 TRIM77I1YAP6 450 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 K7N7A8 449 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 ZNF737O75373 536 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 RGS9O75916 674 aaPredicted RBP10.78□□□□□ -0.68
LTBR-208ENST00000541005 KDM4BO94953 1096 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 CD2P06729 351 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 C21orf33P30042 268 aaPredicted RBP10.78□□□□□ -0.68
LTBR-208ENST00000541005 POU3F4P49335 361 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 CEBPDP49716 269 aaPredicted RBP10.78□□□□□ -0.68
LTBR-208ENST00000541005 ZP1P60852 638 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 ZNF146Q15072 292 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 C6orf141Q5SZD1 244 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 FIP1L1Q6UN15 594 aaKnown RBP10.78□□□□□ -0.68
LTBR-208ENST00000541005 VMO1Q7Z5L0 202 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 Q8N7P7 452 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 SIGLECL1Q8N7X8 197 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 ZSCAN4Q8NAM6 433 aaPredicted RBP10.78□□□□□ -0.68
LTBR-208ENST00000541005 BPIFB6Q8NFQ5 453 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 FAM216AQ8WUB2 273 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 GATAD2BQ8WXI9 593 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 H1FXQ92522 213 aaKnown RBP10.78□□□□□ -0.68
LTBR-208ENST00000541005 EMG1Q92979 244 aaKnown RBP10.78□□□□□ -0.68
LTBR-208ENST00000541005 PGLYRP3Q96LB9 341 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 ANKRD60Q9BZ19 345 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 ELL3Q9HB65 397 aaPredicted RBP10.78□□□□□ -0.68
LTBR-208ENST00000541005 RBFOX1Q9NWB1 397 aaKnown RBP10.78□□□□□ -0.68
LTBR-208ENST00000541005 ONECUT1Q9UBC0 465 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 ZNF281Q9Y2X9 895 aa10.78□□□□□ -0.68
LTBR-208ENST00000541005 IGHV1-69DA0A0B4J2H0 117 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 IGKV1-12A0A0C4DH73 117 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 H0YHG0 523 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 MYL12BO14950 172 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 IGKV1D-12P01611 117 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 IGHV1-69P01742 117 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 TK1P04183 234 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 CD1AP06126 327 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 CDK1P06493 297 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 CHRM2P08172 466 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 OCM2P0CE71 109 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 OCMP0CE72 109 aaPredicted RBP10.77□□□□□ -0.69
LTBR-208ENST00000541005 RAB3AP20336 220 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 BCL3P20749 454 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 MYF6P23409 242 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 NPBWR2P48146 333 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 HSPA13P48723 471 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 WNT4P56705 351 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 RPS11P62280 158 aaKnown RBP eCLIP10.77□□□□□ -0.69
LTBR-208ENST00000541005 UBA52P62987 128 aaKnown RBP10.77□□□□□ -0.69
LTBR-208ENST00000541005 KISS1Q15726 138 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 YIF1BQ5BJH7 314 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 SPIN3Q5JUX0 258 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 RBMS3Q6XE24 437 aaKnown RBP10.77□□□□□ -0.69
LTBR-208ENST00000541005 BRD3OSQ6XYD6 125 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 RNF144BQ7Z419 303 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 FAM58AQ8N1B3 248 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 BATF2Q8N1L9 274 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 STX19Q8N4C7 294 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 TMEM106AQ96A25 262 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 CPNE2Q96FN4 548 aaPredicted RBP10.77□□□□□ -0.69
LTBR-208ENST00000541005 C1orf147Q96MC9 270 aaPredicted RBP10.77□□□□□ -0.69
LTBR-208ENST00000541005 CDCA4Q9BXL8 241 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 METTL8Q9H825 291 aaKnown RBP10.77□□□□□ -0.69
LTBR-208ENST00000541005 C19orf12Q9NSK7 152 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 OR14J1Q9UGF5 321 aa10.77□□□□□ -0.69
LTBR-208ENST00000541005 A0A1W2PQ09 198 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 DNAJC9-AS1A6NH13 148 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 SPRY1O43609 319 aaPredicted RBP10.76□□□□□ -0.69
LTBR-208ENST00000541005 HAND1O96004 215 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms