RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 MKXQ8IYA7 352 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 BPIFB2Q8N4F0 458 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 OR13C5Q8NGS8 318 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 SGCDQ92629 289 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 GHSRQ92847 366 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 MYDGFQ969H8 173 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 TMEM106AQ96A25 262 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 UPRTQ96BW1 309 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 SDSLQ96GA7 329 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 MDFIQ99750 246 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 SLC6A7Q99884 636 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 ELL3Q9HB65 397 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-215ENST00000540904 NEK6Q9HC98 313 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 HES4Q9HCC6 221 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 RBFOX1Q9NWB1 397 aaKnown RBP7.63□□□□□ -1.19
SNHG1-215ENST00000540904 PAK1IP1Q9NWT1 392 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-215ENST00000540904 TAS2R4Q9NYW5 299 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 ONECUT1Q9UBC0 465 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 ZNF281Q9Y2X9 895 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 MAB21L2Q9Y586 359 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 SVEP1Q4LDE5 3571 aa7.63□□□□□ -1.19
SNHG1-215ENST00000540904 RNF212BA8MTL3 300 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 MAGEB3O15480 346 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 IGHV4-38-2P0DP08 117 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 CALCBP10092 127 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 MMP9P14780 707 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 CELP19835 753 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 RAB3AP20336 220 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 BCL3P20749 454 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 VHLP40337 213 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 NPBWR2P48146 333 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 CAV3P56539 151 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 TAS2R43P59537 309 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 KISS1Q15726 138 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 RNF144BQ7Z419 303 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 Q8IYB0 196 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 BCL6BQ8N143 479 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-215ENST00000540904 ZNF561Q8N587 486 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 NANOGP1Q8N7R0 232 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 LY6G5BQ8NDX9 201 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 OR51A2Q8NGJ7 313 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 ZNF418Q8TF45 676 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-215ENST00000540904 EMG1Q92979 244 aaKnown RBP7.62□□□□□ -1.19
SNHG1-215ENST00000540904 PGLYRP3Q96LB9 341 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 CNBD2Q96M20 576 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 WDFY2Q96P53 400 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 DCTN5Q9BTE1 182 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 MND1Q9BWT6 205 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 MS4A7Q9GZW8 240 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-215ENST00000540904 ZNF69Q9UC07 566 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 TPRKBQ9Y3C4 175 aa7.62□□□□□ -1.19
SNHG1-215ENST00000540904 IGKV1-12A0A0C4DH73 117 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 A0A1W2PQ09 198 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 ALX3O95076 343 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 VENTXO95231 258 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 IGKV1D-12P01611 117 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 TMEM225BP0DP42 221 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 PRKACAP17612 351 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 DUSP1P28562 367 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 SNU13P55769 128 aaKnown RBP7.61□□□□□ -1.19
SNHG1-215ENST00000540904 PPP3R1P63098 170 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 SLC35A2P78381 396 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 COL10A1Q03692 680 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 DOC2BQ14184 412 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 YIF1BQ5BJH7 314 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 GPR157Q5UAW9 335 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 ASPHD2Q6ICH7 369 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 FIP1L1Q6UN15 594 aaKnown RBP7.61□□□□□ -1.19
SNHG1-215ENST00000540904 BRD3OSQ6XYD6 125 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 SATL1Q86VE3 508 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 CMTM4Q8IZR5 234 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 FAM58AQ8N1B3 248 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 ASCC1Q8N9N2 400 aaKnown RBP7.61□□□□□ -1.19
SNHG1-215ENST00000540904 OR4M1Q8NGD0 313 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 C8orf46Q8TAG6 207 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 TMEM158Q8WZ71 300 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 ORAI1Q96D31 301 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 TBX15Q96SF7 602 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 GPER1Q99527 375 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 NKX3-1Q99801 234 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-215ENST00000540904 SUCNR1Q9BXA5 334 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 CDCA4Q9BXL8 241 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 CCDC90BQ9GZT6 254 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 SIRPDQ9H106 197 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 IL36RNQ9UBH0 155 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 RAB26Q9ULW5 256 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 RRP15Q9Y3B9 282 aaKnown RBP7.61□□□□□ -1.19
SNHG1-215ENST00000540904 PCDHGB5Q9Y5G0 923 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 KPTNQ9Y664 436 aa7.61□□□□□ -1.19
SNHG1-215ENST00000540904 A0A0A6YYJ9 748 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 TRBV5-5A0A0J9YX44 114 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 A0A1W2PPK0 400 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 HAND1O96004 215 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 TK1P04183 234 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 CHRM2P08172 466 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 CRHBPP24387 322 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 DLX1P56177 255 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 ZP1P60852 638 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 RPS11P62280 158 aaKnown RBP eCLIP7.6□□□□□ -1.19
SNHG1-215ENST00000540904 RPL31P62899 125 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms