RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 MED21Q13503 144 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 C6orf141Q5SZD1 244 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 METTL11BQ5VVY1 283 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 DMKNQ6E0U4 476 aaPredicted RBP13.91□□□□□ -0.18
CD9-209ENST00000540891 ZNF529Q6P280 563 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 SERPINA12Q8IW75 414 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 ZNF561Q8N587 486 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 ZFP41Q8N8Y5 198 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 ZDHHC22Q8N966 263 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 OR13C5Q8NGS8 318 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 TSEN15Q8WW01 171 aaKnown RBP13.91□□□□□ -0.18
CD9-209ENST00000540891 DMRTB1Q96MA1 342 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 C19orf24Q9BVV8 132 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 SUCNR1Q9BXA5 334 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 RBFOX1Q9NWB1 397 aaKnown RBP13.91□□□□□ -0.18
CD9-209ENST00000540891 CHCHD3Q9NX63 227 aaKnown RBP13.91□□□□□ -0.18
CD9-209ENST00000540891 IL36RNQ9UBH0 155 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 OR14J1Q9UGF5 321 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 KPTNQ9Y664 436 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 COL6A5A8TX70 2615 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 CENPVL3A0A0U1RRI6 287 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 H0YHG0 523 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 SLC1A7O00341 560 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 SULT1B1O43704 296 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 ANGPTL7O43827 346 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 PDZK1IP1Q13113 114 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 RUSC1-AS1Q66K80 236 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 BRD3OSQ6XYD6 125 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 STX19Q8N4C7 294 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 Q8N7P7 452 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 SIGLECL1Q8N7X8 197 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 OR51A2Q8NGJ7 313 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 OR5D18Q8NGL1 313 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 OR5D14Q8NGL3 314 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 GPR148Q8TDV2 347 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 SGCDQ92629 289 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 PGLYRP3Q96LB9 341 aa13.9□□□□□ -0.18
CD9-209ENST00000540891 MS4A7Q9GZW8 240 aaPredicted RBP13.9□□□□□ -0.18
CD9-209ENST00000540891 PAK1IP1Q9NWT1 392 aaPredicted RBP13.9□□□□□ -0.18
CD9-209ENST00000540891 ZNF737O75373 536 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 ATP6V1G2O95670 118 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 BCL3P20749 454 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 MYF6P23409 242 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 DLX1P56177 255 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 ZP1P60852 638 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 RPS11P62280 158 aaKnown RBP eCLIP13.89□□□□□ -0.19
CD9-209ENST00000540891 COL10A1Q03692 680 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 RIPK1Q13546 671 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 IZUMO2Q6UXV1 221 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 VMO1Q7Z5L0 202 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 MKXQ8IYA7 352 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 KIR3DL3Q8N743 410 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 NANOGP1Q8N7R0 232 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 SPATA3Q8NHX4 192 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 GHSRQ92847 366 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 EMG1Q92979 244 aaKnown RBP13.89□□□□□ -0.19
CD9-209ENST00000540891 C1orf147Q96MC9 270 aaPredicted RBP13.89□□□□□ -0.19
CD9-209ENST00000540891 ANKRD60Q9BZ19 345 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 C19orf12Q9NSK7 152 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 TAS2R4Q9NYW5 299 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 ONECUT1Q9UBC0 465 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 ZNF281Q9Y2X9 895 aa13.89□□□□□ -0.19
CD9-209ENST00000540891 TRBV5-5A0A0J9YX44 114 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 MDFIC2A0A1B0GVS7 189 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 TK1P04183 234 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 CDK1P06493 297 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 OCM2P0CE71 109 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 OCMP0CE72 109 aaPredicted RBP13.88□□□□□ -0.19
CD9-209ENST00000540891 CALCBP10092 127 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 WNT4P56705 351 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 PRB3Q04118 309 aaPredicted RBP13.88□□□□□ -0.19
CD9-209ENST00000540891 PDCD1Q15116 288 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 GPR157Q5UAW9 335 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 Q8IYB0 196 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.88□□□□□ -0.19
CD9-209ENST00000540891 LHX4Q969G2 390 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 TMEM106AQ96A25 262 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 SIRT7Q9NRC8 400 aa13.88□□□□□ -0.19
CD9-209ENST00000540891 TRBV23-1A0A0A0MS06 115 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 TMEM82A0PJX8 343 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 PTGES3LE9PB15 166 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 K7N7A8 449 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 MYL12BO14950 172 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 KDM4BO94953 1096 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 CHRM2P08172 466 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 HCKP08631 526 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 RAB3AP20336 220 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 CAPZA1P52907 286 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 ZNF146Q15072 292 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 KISS1Q15726 138 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 RNLSQ5VYX0 342 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 FAM58AQ8N1B3 248 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 ZFAND2BQ8WV99 257 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 TNFRSF14Q92956 283 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 ORAI1Q96D31 301 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 JMJD8Q96S16 334 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 FAM234AQ9H0X4 552 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 VCX3BQ9H321 246 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 SEBOXQ9HB31 216 aaPredicted RBP13.87□□□□□ -0.19
CD9-209ENST00000540891 HMG20AQ9NP66 347 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms