RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 MFFQ9GZY8 342 aa11.89□□□□□ -0.51
RTN3-210ENST00000540798 ARL6Q9H0F7 186 aa11.89□□□□□ -0.51
RTN3-210ENST00000540798 SPAARA0A1B0GVQ0 90 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 C5orf49A4QMS7 147 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 IL18BPO95998 194 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 SFTPBP07988 381 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 VAMP1P23763 118 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 ECI1P42126 302 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 CHRFAM7AQ494W8 412 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 CALHM1Q8IU99 346 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 OR10AD1Q8NGE0 317 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 SULT4A1Q9BR01 284 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 LRFN3Q9BTN0 628 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 FAAP24Q9BTP7 215 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 PRSS50Q9UI38 385 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 GPR160Q9UJ42 338 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 ZNF850A8MQ14 1090 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 SDCBPO00560 298 aaPredicted RBP11.88□□□□□ -0.51
RTN3-210ENST00000540798 RAB1AP62820 205 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 NKAPLQ5M9Q1 402 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 CLEC18BQ6UXF7 455 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 GSG1LQ6UXU4 331 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 MCEMP1Q8IX19 187 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 OR1K1Q8NGR3 316 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 PPP1R1CQ8WVI7 109 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 ZNF75AQ96N20 296 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 BCL2L14Q9BZR8 327 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 ANXA10Q9UJ72 324 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 OTOGLQ3ZCN5 2332 aa11.88□□□□□ -0.51
RTN3-210ENST00000540798 DNAJC13O75165 2243 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 GEMIN2O14893 280 aaKnown RBP11.87□□□□□ -0.51
RTN3-210ENST00000540798 IGHG3P01860 377 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 AANATQ16613 207 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 PIGYQ3MUY2 71 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 ZNF546Q86UE3 836 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 SAXO1Q8IYX7 474 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 KCNRGQ8N5I3 272 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 OR56B2PQ8NGI1 322 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 CASTOR1Q8WTX7 329 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 BCL2L2Q92843 193 aaPredicted RBP11.87□□□□□ -0.51
RTN3-210ENST00000540798 NMES1Q9C002 83 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 OPA3Q9H6K4 179 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 PCDHB16Q9NRJ7 776 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 CRIM1Q9NZV1 1036 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 CSAG2Q9Y5P2 127 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 A0A0D9SG52 128 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 TEX46H3BTG2 121 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 NKX2-8O15522 239 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 PLATP00750 562 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 FCGR3AP08637 254 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 RBM11P57052 281 aaKnown RBP11.87□□□□□ -0.51
RTN3-210ENST00000540798 VASH2Q86V25 355 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 FBXL14Q8N1E6 418 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 HPSE2Q8WWQ2 592 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 WBP1Q96G27 269 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 LDAHQ9H6V9 325 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 RAB18Q9NP72 206 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 ZNF701Q9NV72 531 aaPredicted RBP11.87□□□□□ -0.51
RTN3-210ENST00000540798 DCAF16Q9NXF7 216 aa11.87□□□□□ -0.51
RTN3-210ENST00000540798 SLC22A20A6NK97 555 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 RRASP10301 218 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 SRSF6Q13247 344 aaKnown RBP11.86□□□□□ -0.51
RTN3-210ENST00000540798 FBXW9Q5XUX1 488 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 ELP2Q6IA86 826 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 OR51F2Q8NH61 342 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 SCARB1Q8WTV0 552 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 SEC22AQ96IW7 307 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 PDCD10Q9BUL8 212 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 RNF222A6NCQ9 220 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A10PA6NDY2 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A18PA6NE21 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A16PA6NEW6 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A20PA6NIJ5 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A8PA6NJQ4 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A7PA6NKC0 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A22PA8MWA6 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A12PA8MX19 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A5PA8MXJ8 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A23PA8MXZ1 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 OR2F2O95006 317 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A15PP0C7V4 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A13PP0C7W8 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A14PP0C7W9 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 FAM90A24PP0C7X0 464 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 CD79AP11912 226 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 CCL2P13500 99 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 MALLQ13021 153 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 PRDX4Q13162 271 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 OR2F1Q13607 317 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 CEACAM21Q3KPI0 293 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 DHRS11Q6UWP2 260 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 TMPRSS7Q7RTY8 843 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 ZNF611Q8N823 705 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 MED9Q9NWA0 146 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 ST3GAL6Q9Y274 331 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 STARD10Q9Y365 291 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 TRBV6-7A0A0A0MS04 114 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 PDCD6O75340 191 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 CRHP06850 196 aa11.86□□□□□ -0.51
RTN3-210ENST00000540798 ARHGDIBP52566 201 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms