RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 MRPL37Q9BZE1 423 aaKnown RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 LAT2Q9GZY6 243 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PPP1R3EQ9H7J1 279 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PLEKHF2Q9H8W4 249 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 ISG20L2Q9H9L3 353 aaKnown RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 WSB2Q9NYS7 404 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 IER3IP1Q9Y5U9 82 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 A0A1W2PPC4 97 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 EPOPA6NHQ4 379 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 SIRPB1O00241 398 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PGA4P0DJD7 388 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PGA5P0DJD9 388 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 OR8G3PP0DMU2 310 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 ACKR3P25106 362 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 EFNA3P52797 238 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 SUB1P53999 127 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 ERVK-16P61578 105 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 KMT5CQ86Y97 462 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 OR10G6Q8NH81 332 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 ADGRG7Q96K78 797 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 DERL3Q96Q80 235 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 HRASLS2Q9NWW9 162 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 KCNE5Q9UJ90 142 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 VDAC3Q9Y277 283 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 TLCD2A6NGC4 264 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 SLC17A2O00624 439 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 CYC1P08574 325 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 P2RY1P47900 373 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 TFPI2P48307 235 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 RPS20P60866 119 aaKnown RBP5.4□□□□□ -1.54
PTPRD-214ENST00000540109 IGLV3-21P80748 117 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-214ENST00000540109 IL24Q13007 206 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 TMEM99Q8N816 258 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 MORN4Q8NDC4 146 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 OR2T10Q8NGZ9 312 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 SPTSSAQ969W0 71 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 RNF2Q99496 336 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 ULBP3Q9BZM4 244 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 DOCK8Q8NF50 2099 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 KIAA0100Q14667 2235 aaKnown RBP5.4□□□□□ -1.54
PTPRD-214ENST00000540109 A0A1W2PPC1 479 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 H0YGG7 62 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 H0YIG0 161 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 H7C1C5 153 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 DNPH1O43598 174 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 HSBP1O75506 76 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 NKX2-2O95096 273 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 HKR1P10072 659 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 RAC2P15153 192 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 NKX2-1P43699 371 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-214ENST00000540109 ID2Q02363 134 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 MRPL49Q13405 166 aaKnown RBP5.4□□□□□ -1.54
PTPRD-214ENST00000540109 PDLIM3Q53GG5 364 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF787Q6DD87 383 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 RPL7L1Q6DKI1 246 aaKnown RBP5.4□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF880Q6PDB4 577 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 DHRS13Q6UX07 377 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 LRRC18Q8N456 261 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 RCBTB1Q8NDN9 531 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 STXBP6Q8NFX7 210 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 BOD1Q96IK1 185 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 TMEM59Q9BXS4 323 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 NAT8BQ9UHF3 227 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 LHX6Q9UPM6 363 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 SELENOKQ9Y6D0 94 aa5.4□□□□□ -1.54
PTPRD-214ENST00000540109 GOLGB1Q14789 3259 aaKnown RBP5.4□□□□□ -1.55
PTPRD-214ENST00000540109 NSG1A0A0A6YYJ2 146 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 FFAR1O14842 300 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 XRCC2O43543 280 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 SPINK4O60575 86 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 GABRA6Q16445 453 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 ZNF468Q5VIY5 522 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-214ENST00000540109 STUMQ69YW2 141 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 JMJD6Q6NYC1 403 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-214ENST00000540109 CA13Q8N1Q1 262 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 AMER3Q8N944 861 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 PLPP7Q8NBV4 271 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 TNFSF18Q9UNG2 199 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 K7EQM0 130 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 CTNSO60931 367 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 GPANK1O95872 356 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 ERVFC1-1P60608 527 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 SPATA45Q537H7 98 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 LDLRAD2Q5SZI1 272 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-214ENST00000540109 FHL5Q5TD97 284 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 TSACCQ96A04 125 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-214ENST00000540109 AICDAQ9GZX7 198 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 OR2D2Q9H210 308 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 ZNF442Q9H7R0 627 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 MTCH2Q9Y6C9 303 aa5.4□□□□□ -1.55
PTPRD-214ENST00000540109 DHRS7CA6NNS2 312 aa5.39□□□□□ -1.55
PTPRD-214ENST00000540109 H3BQ15 152 aa5.39□□□□□ -1.55
PTPRD-214ENST00000540109 IGHA1P01876 353 aa5.39□□□□□ -1.55
PTPRD-214ENST00000540109 F2RP25116 425 aa5.39□□□□□ -1.55
PTPRD-214ENST00000540109 TSPAN7P41732 249 aa5.39□□□□□ -1.55
PTPRD-214ENST00000540109 HHEXQ03014 270 aa5.39□□□□□ -1.55
PTPRD-214ENST00000540109 GAGE1Q13065 139 aa5.39□□□□□ -1.55
PTPRD-214ENST00000540109 FAM219AQ8IW50 185 aa5.39□□□□□ -1.55
PTPRD-214ENST00000540109 GATSQ8NAP1 163 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms