RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 KCNG3Q8TAE7 436 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 NINJ1Q92982 152 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 SEH1LQ96EE3 360 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 C6orf62Q9GZU0 229 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CST11Q9H112 138 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 HES4Q9HCC6 221 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 IL36RNQ9UBH0 155 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ETV7Q9Y603 341 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 RP2O75695 350 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 MPIG6BO95866 241 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 F12P00748 615 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 MGMTP16455 207 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 GLRA1P23415 457 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 EFNA4P52798 201 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 MZT2AQ6P582 158 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 SPNS3Q6ZMD2 512 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 OSR2Q8N2R0 312 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 SAMD12Q8N8I0 201 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 RDH5Q92781 318 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 HPS1Q92902 700 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 EMG1Q92979 244 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 SLC25A38Q96DW6 304 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 MMP27Q9H306 513 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 A3GALT2U3KPV4 340 aa15.9■□□□□ 0.14
TNFRSF1A-213ENST00000540022 LRRC30A6NM36 301 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 TMEM178BH3BS89 294 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 HPGDSO60760 199 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 NXPH2O95156 264 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 IGHV4-39P01824 125 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 GTF2F2P13984 249 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 IRF2P14316 349 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 DAOP14920 347 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ART1P52961 327 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 FGF12P61328 243 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 HFEQ30201 348 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 METAP1DQ6UB28 335 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 BIVMQ86UB2 503 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 Q8IYB0 196 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 FAM58AQ8N1B3 248 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 C19orf18Q8NEA5 215 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 GAL3ST1Q99999 423 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 TMEM59Q9BXS4 323 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 MIXL1Q9H2W2 232 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RHOFQ9HBH0 211 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 HMG20AQ9NP66 347 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ZNF701Q9NV72 531 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RAB22AQ9UL26 194 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RGS5O15539 181 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ZNF205O95201 554 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PRKACAP17612 351 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RAB6AP20340 208 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 CD80P33681 288 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 SNU13P55769 128 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 MRPS11P82912 194 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ACP7Q6ZNF0 438 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PTX4Q96A99 478 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 SELENOIQ9C0D9 397 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 LPAR5Q9H1C0 372 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 DLL4Q9NR61 685 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PCDHB16Q9NRJ7 776 aa15.89■□□□□ 0.13
TNFRSF1A-213ENST00000540022 IFNL4K9M1U5 179 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 CLPXO76031 633 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 EIF4EP06730 217 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RPS27AP62979 156 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PIGYQ3MUY2 71 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 SFRP4Q6FHJ7 346 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 LAX1Q8IWV1 398 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 C1orf87Q8N0U7 546 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 OR51T1Q8NGJ9 327 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 MRPS24Q96EL2 167 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 Q96M66 194 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 NICN1Q9BSH3 213 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RHBDL2Q9NX52 303 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RASL12Q9NYN1 266 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ST3GAL6Q9Y274 331 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 NPTNQ9Y639 398 aa15.88■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ACANP16112 2415 aa15.87■□□□□ 0.13
TNFRSF1A-213ENST00000540022 A0A0A6YYD4 124 aa15.87■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ELK1P19419 428 aa15.87■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RBM11P57052 281 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1A-213ENST00000540022 UBE2NLQ5JXB2 153 aa15.87■□□□□ 0.13
TNFRSF1A-213ENST00000540022 CMTM4Q8IZR5 234 aa15.87■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ZNF581Q9P0T4 197 aa15.87■□□□□ 0.13
TNFRSF1A-213ENST00000540022 IGHV3OR15-7A0A075B7D8 119 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 GEMIN2O14893 280 aaKnown RBP15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PAX1P15863 534 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 DUSP1P28562 367 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PTH2RP49190 550 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PDCD1Q15116 288 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 TAF9Q16594 264 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 NHLRC3Q5JS37 347 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 OR6Q1Q8NGQ2 317 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 FOXC2Q99958 501 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 TM2D1Q9BX74 207 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ATG5Q9H1Y0 275 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ABCG5Q9H222 651 aa15.86■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PPIAL4EA0A075B759 164 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PPIAL4DF5H284 164 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 APOA1P02647 267 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms