RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-215	ENST00000539712	MIDN	Q504T8	468 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	CRIP3	Q6Q6R5	217 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	SLC25A26	Q70HW3	274 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	RNF144B	Q7Z419	303 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	FAM220A	Q7Z4H9	259 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	ACBD7	Q8N6N7	88 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	BEND2	Q8NDZ0	799 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	DNAAF1	Q8NEP3	725 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	OR51A4	Q8NGJ6	313 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	PP6455	Q8WZ26	134 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	PELI1	Q96FA3	418 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	CITED1	Q99966	193 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	IL36RN	Q9UBH0	155 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	MYRF	Q9Y2G1	1151 aa		13.65	□□□□□ -0.22
DDB1-215	ENST00000539712	DSCAML1	Q8TD84	2053 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	ANGPTL7	O43827	346 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	INMT	O95050	263 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	NPBWR2	P48146	333 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	CCR9	P51686	369 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	ZNF91	Q05481	1191 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	TMEM244	Q5VVB8	128 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	GDPGP1	Q6ZNW5	385 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	C17orf107	Q6ZR85	190 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	UTS2B	Q765I0	119 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	TCF23	Q7RTU1	214 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	FGGY	Q96C11	551 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	MEGF9	Q9H1U4	602 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	C16orf95	Q9H693	158 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	SEBOX	Q9HB31	216 aa	Predicted RBP	13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	GMPPB	Q9Y5P6	360 aa		13.64	□□□□□ -0.23
DDB1-215	ENST00000539712	C17orf98	A8MV24	154 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712		J3QLW9	94 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	TSPAN9	O75954	239 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	CLPX	O76031	633 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	SERPINA3	P01011	423 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	CHRM2	P08172	466 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	DBT	P11182	482 aa	Known RBP	13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	PIP	P12273	146 aa	Predicted RBP	13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	ZNF19	P17023	458 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	ATF1	P18846	271 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	LHFPL3	Q86UP9	236 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	EGFL6	Q8IUX8	553 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	PQLC1	Q8N2U9	271 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	PIFO	Q8TCI5	191 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	BORCS8	Q96FH0	119 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	C4orf36	Q96KX1	117 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	C9orf16	Q9BUW7	83 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	ISG20L2	Q9H9L3	353 aa	Known RBP	13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	AMBN	Q9NP70	447 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	RBFOX1	Q9NWB1	397 aa	Known RBP	13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	RNF114	Q9Y508	228 aa		13.63	□□□□□ -0.23
DDB1-215	ENST00000539712	IGKV1-12	A0A0C4DH73	117 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	MEX3A	A1L020	520 aa	Known RBP	13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	FAM90A8P	A6NJQ4	464 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712		E9PI62	339 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	PAH	P00439	452 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	IGKV1D-12	P01611	117 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	IGHA1	P01876	353 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	AZGP1	P25311	298 aa	Known RBP	13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	RBP2	P50120	134 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	BMX	P51813	675 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	GALE	Q14376	348 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	CNN3	Q15417	329 aa	Known RBP	13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	LDLRAD2	Q5SZI1	272 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	TREML4	Q6UXN2	200 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	OR52N4	Q8NGI2	321 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	OR5R1	Q8NH85	324 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	PPP1R35	Q8TAP8	253 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	APH1B	Q8WW43	257 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	HEXA-AS1	Q9H8Q6	139 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	MRPS18A	Q9NVS2	196 aa	Known RBP	13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	FAM118A	Q9NWS6	357 aa		13.62	□□□□□ -0.23
DDB1-215	ENST00000539712	LOC100130705	A0A1B0GUX0	176 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712		H3BUX3	64 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	PSPN	O60542	156 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	HTR1A	P08908	422 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	BCL3	P20749	454 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	DUSP1	P28562	367 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	MTCP1	P56278	107 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	PDZK1IP1	Q13113	114 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	ALKBH1	Q13686	389 aa	Known RBP	13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	ZNF782	Q6ZMW2	699 aa	Predicted RBP	13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	ZBTB49	Q6ZSB9	765 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	C10orf67	Q8IYJ2	551 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	OR8H2	Q8N162	312 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	DYNAP	Q8N1N2	210 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	SYS1	Q8N2H4	156 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	ASCC1	Q8N9N2	400 aa	Known RBP	13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	SNX22	Q96L94	193 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	SSX3	Q99909	188 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	ALG8	Q9BVK2	526 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	ERVK13-1	Q9NX77	482 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	HHLA2	Q9UM44	414 aa		13.61	□□□□□ -0.23
DDB1-215	ENST00000539712	TRBV2	A0A0J9YWF9	115 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712		A0A1W2PPH5	198 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	SNTN	A6NMZ2	147 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	EBAG9	O00559	213 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	WIPF1	O43516	503 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	HAND1	O96004	215 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	MT-ND2	P03891	347 aa		13.6	□□□□□ -0.23

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