RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 DEFB108BQ8NET1 73 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 OR10AD1Q8NGE0 317 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 RAB39BQ96DA2 213 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 DIRC2Q96SL1 478 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 S100A13Q99584 98 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 DCSTAMPQ9H295 470 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 PLGRKTQ9HBL7 147 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 PPIAL4EA0A075B759 164 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 PPIAL4CA0A0B4J2A2 164 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 SMIM30A4D0T7 59 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 A6NLC8 198 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 ZNF732B4DXR9 585 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 PPIAL4DF5H284 164 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 H3BMQ9 156 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 M0QZ24 198 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 ZNF701M0R085 212 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 CDC14BO60729 498 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 IL1AP01583 271 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 PPIAL4FP0DN26 164 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 IGFBP3P17936 291 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 SOX6P35712 828 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 ZNF93P35789 620 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 RANBP1P43487 201 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 POU3F4P49335 361 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 SRP9P49458 86 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 RBP2P50120 134 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 GPM6AP51674 278 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 GNG3P63215 75 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 TNFAIP6P98066 277 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 UBE2V2Q15819 145 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 CEACAM21Q3KPI0 293 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 KIR3DL3Q8N743 410 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 OR5A2Q8NGI9 324 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 OR51A2Q8NGJ7 313 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 RFT1Q96AA3 541 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 FOXRED1Q96CU9 486 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 EGLN1Q9GZT9 426 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 PPIL3Q9H2H8 161 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 DECR2Q9NUI1 292 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 SOX21Q9Y651 276 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 V9GY05 133 aa10.42□□□□□ -0.74
CLSTN3-208ENST00000538933 EPPK1P58107 5090 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 A0A1B0GUS0 222 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 A6NHS1 94 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 ZSCAN5BA6NJL1 495 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 TMEM210A6NLX4 147 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 C17orf100A8MU93 164 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 F5H5P2 479 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 H0YL77 283 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 MLNRO43193 412 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 CYB5AP00167 134 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 PLATP00750 562 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 KNG1P01042 644 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 GRPP07492 148 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 MMP15P51511 669 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 LCN2P80188 198 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 TMEM255AQ5JRV8 349 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 C16orf87Q6PH81 154 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 ZNF573Q86YE8 665 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 CROCCP3Q8IVE0 287 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 DNAAF1Q8NEP3 725 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 OR52N4Q8NGI2 321 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 NDNFQ8TB73 568 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 OR5P3Q8WZ94 311 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 GTF3AQ92664 365 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 ITPKCQ96DU7 683 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 SPACA5Q96QH8 159 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 RBM38Q9H0Z9 239 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 PPP1R3EQ9H7J1 279 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 ELL3Q9HB65 397 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 MMP26Q9NRE1 261 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 WIPI2Q9Y4P8 454 aa10.41□□□□□ -0.74
CLSTN3-208ENST00000538933 PLXNB1O43157 2135 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 IGKV1-9A0A0C4DH69 117 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 hCG_1807616A0A1W2PRN6 198 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 IGHV1-46P01743 117 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 ALDOBP05062 364 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 CLEC2LP0C7M8 214 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 TNFRSF1AP19438 455 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 HAAOP46952 286 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 RORCP51449 518 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 CCL8P80075 99 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 RELBQ01201 579 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 HNRNPA0Q13151 305 aaKnown RBP10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 SPCS2Q15005 226 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 KISS1Q15726 138 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 RAB11BQ15907 218 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 PCGF3Q3KNV8 242 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 HES5Q5TA89 166 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 Q6ZR03 302 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 C17orf107Q6ZR85 190 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 LRRTM1Q86UE6 522 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 OR5D18Q8NGL1 313 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 ZNF671Q8TAW3 534 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 HPSE2Q8WWQ2 592 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 OR2V2Q96R30 315 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 DCUN1D5Q9BTE7 237 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 CACNG2Q9Y698 323 aa10.4□□□□□ -0.74
CLSTN3-208ENST00000538933 TANC2Q9HCD6 1990 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 IGHV3-64DA0A0J9YX35 117 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms