RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 MYO9BQ13459 2157 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 A0A1B0GTQ1 180 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 HSPB2A8KAH6 182 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 LGALS7P47929 136 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 REG1BP48304 166 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 WNT3P56703 355 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 GGTLC2Q14390 218 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 HSPB2Q16082 182 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 GVQW1Q8N7I0 195 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 ZNF441Q8N8Z8 693 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 PP6455Q8WZ26 134 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 COX14Q96I36 57 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 VSTM2LQ96N03 204 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 DCAF16Q9NXF7 216 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 TRAV39A0A0B4J263 110 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 PPP1R2P9O14990 202 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 EVX1P49640 407 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 ASAH1Q13510 395 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 OR2Y1Q8NGV0 311 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 ZNF768Q9H5H4 540 aaKnown RBP9.92□□□□□ -0.82
LINC00346-201ENST00000538077 UFC1Q9Y3C8 167 aa9.92□□□□□ -0.82
LINC00346-201ENST00000538077 A0A1W2PPQ1 181 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 DNPH1O43598 174 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 GABRA1P14867 456 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 CTLA4P16410 223 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 CADM3Q8N126 398 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 MAP6Q96JE9 813 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 ZMIZ1Q9ULJ6 1067 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 SMAD7O15105 426 aaKnown RBP9.91□□□□□ -0.82
LINC00346-201ENST00000538077 HAND1O96004 215 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 FGF2P09038 288 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 AMTP48728 403 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 LURAP1Q96LR2 239 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 TNS1Q9HBL0 1735 aaKnown RBP9.91□□□□□ -0.82
LINC00346-201ENST00000538077 SERPINE3A8MV23 424 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 CDIPTO14735 213 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 LALBAP00709 142 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 PTBP1P26599 531 aaKnown RBP eCLIP9.91□□□□□ -0.82
LINC00346-201ENST00000538077 NSUN5P2Q63ZY6 315 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 LAMP3Q9UQV4 416 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 KCNMB2Q9Y691 235 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 TRAV38-1A0A0B4J264 116 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 LOC102723971A0A1B0GUV8 181 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 HRASP01112 189 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 PMCHP20382 165 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 TPPP2P59282 170 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 ZNF485Q8NCK3 441 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 OR10AC1Q8NH08 325 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 HGDQ93099 445 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 TTTY12Q9BZ98 90 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 SCN9AQ15858 1988 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 ATP6V1G2-DDX39BF2Z307 99 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 DYNLRB2Q8TF09 96 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 SRRQ9GZT4 340 aa9.91□□□□□ -0.82
LINC00346-201ENST00000538077 OR2M5A3KFT3 312 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 HAX1O00165 279 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 HOXC4P09017 264 aaPredicted RBP9.9□□□□□ -0.82
LINC00346-201ENST00000538077 CLDN20P56880 219 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 CABLES2Q9BTV7 478 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 CACNG5Q9UF02 275 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 AUP1Q9Y679 476 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 SP1P08047 785 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 FTH1P19P0C7X4 201 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 HIST1H1DP16402 221 aaKnown RBP9.9□□□□□ -0.82
LINC00346-201ENST00000538077 RAB7AP51149 207 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 SLC38A11Q08AI6 406 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 RNFT1Q5M7Z0 435 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 TSPO2Q5TGU0 170 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 C12orf73Q69YU5 71 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 RNASEKQ6P5S7 137 aaKnown RBP9.9□□□□□ -0.82
LINC00346-201ENST00000538077 LRRC37AA6NMS7 1700 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 NKX2-8O15522 239 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 OR5AC1P0C628 307 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 IGFBP7Q16270 282 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 ATP1A1-AS1Q5TC04 95 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 SPSB1Q96BD6 273 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 PECRQ9BY49 303 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 NTMQ9P121 344 aa9.9□□□□□ -0.82
LINC00346-201ENST00000538077 ZNF716A6NP11 495 aa9.9□□□□□ -0.83
LINC00346-201ENST00000538077 SLC17A2O00624 439 aa9.9□□□□□ -0.83
LINC00346-201ENST00000538077 KCNAB3O43448 404 aa9.9□□□□□ -0.83
LINC00346-201ENST00000538077 ADRA2AP08913 450 aa9.9□□□□□ -0.83
LINC00346-201ENST00000538077 MDH2P40926 338 aaKnown RBP9.9□□□□□ -0.83
LINC00346-201ENST00000538077 CDK5Q00535 292 aa9.9□□□□□ -0.83
LINC00346-201ENST00000538077 PLEKHA2Q9HB19 425 aa9.9□□□□□ -0.83
LINC00346-201ENST00000538077 TRAV1-2A0A0B4J238 106 aa9.9□□□□□ -0.83
LINC00346-201ENST00000538077 EPOPA6NHQ4 379 aa9.9□□□□□ -0.83
LINC00346-201ENST00000538077 G0S2P27469 103 aa9.9□□□□□ -0.83
LINC00346-201ENST00000538077 COL13A1Q5TAT6 717 aaPredicted RBP9.9□□□□□ -0.83
LINC00346-201ENST00000538077 NXF2Q9GZY0 626 aaKnown RBP9.9□□□□□ -0.83
LINC00346-201ENST00000538077 SEBOXQ9HB31 216 aaPredicted RBP9.9□□□□□ -0.83
LINC00346-201ENST00000538077 DOCK5Q9H7D0 1870 aa9.89□□□□□ -0.83
LINC00346-201ENST00000538077 IGLV3-16A0A075B6K0 115 aa9.89□□□□□ -0.83
LINC00346-201ENST00000538077 ACTL6AO96019 429 aa9.89□□□□□ -0.83
LINC00346-201ENST00000538077 LIMS3P0CW19 117 aa9.89□□□□□ -0.83
LINC00346-201ENST00000538077 LIMS4P0CW20 117 aa9.89□□□□□ -0.83
LINC00346-201ENST00000538077 HOXC8P31273 242 aa9.89□□□□□ -0.83
LINC00346-201ENST00000538077 CEACAM3P40198 252 aa9.89□□□□□ -0.83
LINC00346-201ENST00000538077 ETV3LQ6ZN32 361 aa9.89□□□□□ -0.83
LINC00346-201ENST00000538077 FAM219AQ8IW50 185 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms