RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 ZNF728P0DKX0 622 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 PIPP12273 146 aaPredicted RBP10.66□□□□□ -0.7
RTN3-207ENST00000536011 CCL3L1P16619 93 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 BMXP51813 675 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 EFNB2P52799 333 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 EDDM3BP56851 147 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 COL10A1Q03692 680 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 MEF2CQ06413 473 aaPredicted RBP10.66□□□□□ -0.7
RTN3-207ENST00000536011 ZNF273Q14593 569 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 ODF4Q2M2E3 257 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 OR8H2Q8N162 312 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 FAM110DQ8TAY7 271 aaPredicted RBP10.66□□□□□ -0.7
RTN3-207ENST00000536011 RPS4Y2Q8TD47 263 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 C17orf50Q8WW18 174 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 RORBQ92753 470 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 CENPNQ96H22 339 aaPredicted RBP10.66□□□□□ -0.7
RTN3-207ENST00000536011 RIBC2Q9H4K1 309 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 IMPAD1Q9NX62 359 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 GLS2Q9UI32 602 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 ORC6Q9Y5N6 252 aa10.66□□□□□ -0.7
RTN3-207ENST00000536011 TET2Q6N021 2002 aaPredicted RBP10.65□□□□□ -0.7
RTN3-207ENST00000536011 LOC107986453A0A1B0GWG9 222 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 hADV38S2A0JD32 116 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 C17orf98A8MV24 154 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 ARG1P05089 322 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 OCM2P0CE71 109 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 OCMP0CE72 109 aaPredicted RBP10.65□□□□□ -0.7
RTN3-207ENST00000536011 RBP2P50120 134 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 ACTC1P68032 377 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 ACTA1P68133 377 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 ZNF782Q6ZMW2 699 aaPredicted RBP10.65□□□□□ -0.7
RTN3-207ENST00000536011 SLC25A26Q70HW3 274 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 SSX6Q7RTT6 188 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 AMIGO2Q86SJ2 522 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 BATF2Q8N1L9 274 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 C11orf42Q8N5U0 333 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 DNAAF1Q8NEP3 725 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 TRUB1Q8WWH5 349 aaKnown RBP10.65□□□□□ -0.7
RTN3-207ENST00000536011 EMG1Q92979 244 aaKnown RBP10.65□□□□□ -0.7
RTN3-207ENST00000536011 MALSU1Q96EH3 234 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 AJUBAQ96IF1 538 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 ZNF714Q96N38 554 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 MYCBPQ99417 103 aaPredicted RBP10.65□□□□□ -0.7
RTN3-207ENST00000536011 SEBOXQ9HB31 216 aaPredicted RBP10.65□□□□□ -0.7
RTN3-207ENST00000536011 GNG8Q9UK08 70 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 OAZ3Q9UMX2 235 aa10.65□□□□□ -0.7
RTN3-207ENST00000536011 PRKDCP78527 4128 aaKnown RBP10.65□□□□□ -0.71
RTN3-207ENST00000536011 FAM90A8PA6NJQ4 464 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 SNTNA6NMZ2 147 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 ZNF737O75373 536 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 ZNF20P17024 532 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 PRKACBP22694 351 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 PEX2P28328 305 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 ATP1B3P54709 279 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 OR12D2P58182 307 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 UBE2V2Q15819 145 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 TMEM244Q5VVB8 128 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 CRIP3Q6Q6R5 217 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 ZBTB49Q6ZSB9 765 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 KCTD20Q7Z5Y7 419 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 EGFL6Q8IUX8 553 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 KLHDC1Q8N7A1 406 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 PPP1R35Q8TAP8 253 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 SLAMF9Q96A28 289 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 MRPL48Q96GC5 212 aaKnown RBP10.64□□□□□ -0.71
RTN3-207ENST00000536011 SNX22Q96L94 193 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 NKX3-1Q99801 234 aaPredicted RBP10.64□□□□□ -0.71
RTN3-207ENST00000536011 NEK6Q9HC98 313 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 MTCH1Q9NZJ7 389 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 PCDHGB5Q9Y5G0 923 aa10.64□□□□□ -0.71
RTN3-207ENST00000536011 A0A0G2JK05 382 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 ODF3BA8MYP8 253 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 APOL3O95236 402 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 HAND1O96004 215 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 ALDOBP05062 364 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 IGHV1-8P0DP01 117 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 GABRR1P24046 479 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 DLX6P56179 175 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 DYNC1I2Q13409 638 aaKnown RBP10.63□□□□□ -0.71
RTN3-207ENST00000536011 EDDM3AQ14507 147 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 GRK1Q15835 563 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 FAM189A2Q15884 450 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 SPIN3Q5JUX0 258 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 MINOS1Q5TGZ0 78 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 ZNF626Q68DY1 528 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 LHFPL2Q6ZUX7 228 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 OR11H6Q8NGC7 330 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 EME1Q96AY2 570 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 SPSB1Q96BD6 273 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 FAM53CQ9NYF3 392 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 TCF19Q9Y242 345 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 LINC00312Q9Y6C7 94 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 MINOS1-NBL1R4GNA1 71 aa10.63□□□□□ -0.71
RTN3-207ENST00000536011 IGKV1-27A0A075B6S5 117 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 TRBV2A0A0J9YWF9 115 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 FUOMA2VDF0 154 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 H3BSH0 61 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 F2RL2O00254 374 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 CHST1O43916 411 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 PEX14O75381 377 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms