RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ZNRF1Q8ND25 227 aa13.49□□□□□ -0.25
ATL3-202ENST00000535789 OR13F1Q8NGS4 319 aa13.49□□□□□ -0.25
ATL3-202ENST00000535789 OR2G2Q8NGZ5 317 aa13.49□□□□□ -0.25
ATL3-202ENST00000535789 C8orf46Q8TAG6 207 aa13.49□□□□□ -0.25
ATL3-202ENST00000535789 TRMT10AQ8TBZ6 339 aaKnown RBP13.49□□□□□ -0.25
ATL3-202ENST00000535789 NPRL2Q8WTW4 380 aa13.49□□□□□ -0.25
ATL3-202ENST00000535789 CHST5Q9GZS9 411 aa13.49□□□□□ -0.25
ATL3-202ENST00000535789 MS4A7Q9GZW8 240 aaPredicted RBP13.49□□□□□ -0.25
ATL3-202ENST00000535789 DNTTIP1Q9H147 329 aa13.49□□□□□ -0.25
ATL3-202ENST00000535789 HES4Q9HCC6 221 aa13.49□□□□□ -0.25
ATL3-202ENST00000535789 FRRS1LQ9P0K9 344 aa13.49□□□□□ -0.25
ATL3-202ENST00000535789 SIRT4Q9Y6E7 314 aaPredicted RBP13.49□□□□□ -0.25
ATL3-202ENST00000535789 NBEAL1Q6ZS30 2694 aa13.49□□□□□ -0.25
ATL3-202ENST00000535789 A0A1B0GVI7 797 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 TMEM89A2RUT3 159 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 F8VVB4 439 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 F8VWA3 439 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 ACAA1P09110 424 aaPredicted RBP13.48□□□□□ -0.25
ATL3-202ENST00000535789 HSMCR30P0CW71 290 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 CPEP16870 476 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 TGFBR2P37173 567 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 GBX2P52951 348 aaPredicted RBP13.48□□□□□ -0.25
ATL3-202ENST00000535789 TAS2R43P59537 309 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 ERVK11-1P61568 191 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 MRPL28Q13084 256 aaKnown RBP13.48□□□□□ -0.25
ATL3-202ENST00000535789 TPBGQ13641 420 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 SLC9A3R2Q15599 337 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 SSX1Q16384 188 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 FDX2Q6P4F2 183 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 RNF144BQ7Z419 303 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 VMO1Q7Z5L0 202 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 ANGPTL5Q86XS5 388 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 ZFP41Q8N8Y5 198 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 PNLDC1Q8NA58 520 aaKnown RBP13.48□□□□□ -0.25
ATL3-202ENST00000535789 OR51A4Q8NGJ6 313 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 HAVCR2Q8TDQ0 301 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 ADAT3Q96EY9 351 aaPredicted RBP13.48□□□□□ -0.25
ATL3-202ENST00000535789 JMJD8Q96S16 334 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 NRIP2Q9BQI9 281 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 PRDM13Q9H4Q3 707 aa13.48□□□□□ -0.25
ATL3-202ENST00000535789 SLC25A10Q9UBX3 287 aaPredicted RBP13.48□□□□□ -0.25
ATL3-202ENST00000535789 CMYA5Q8N3K9 4069 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 IGKV1-9A0A0C4DH69 117 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 NKX6-3A6NJ46 265 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 OGG1O15527 345 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 NDUFB3O43676 98 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 ECDO95905 644 aaPredicted RBP13.47□□□□□ -0.25
ATL3-202ENST00000535789 LIPFP07098 398 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 PRTN3P24158 256 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 COMPP49747 757 aaPredicted RBP13.47□□□□□ -0.25
ATL3-202ENST00000535789 ACTG1P63261 375 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 IL13RA1P78552 427 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 CDK5R1Q15078 307 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 C11orf91Q3C1V1 193 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 CCDC58Q4VC31 144 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 DMKNQ6E0U4 476 aaPredicted RBP13.47□□□□□ -0.25
ATL3-202ENST00000535789 CRIP3Q6Q6R5 217 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 SATL1Q86VE3 508 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 PDZD9Q8IXQ8 264 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 LHX4Q969G2 390 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 YIPF6Q96EC8 236 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 SDSLQ96GA7 329 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 TRRAPQ9Y4A5 3859 aa13.47□□□□□ -0.25
ATL3-202ENST00000535789 OR4C45A6NMZ5 311 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 NOS1APO75052 506 aaPredicted RBP13.46□□□□□ -0.25
ATL3-202ENST00000535789 UBCP0CG48 685 aaKnown RBP13.46□□□□□ -0.25
ATL3-202ENST00000535789 GABRA2P47869 451 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 CAV3P56539 151 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 BAMBIQ13145 260 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 KLRD1Q13241 179 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 ALKBH1Q13686 389 aaKnown RBP13.46□□□□□ -0.25
ATL3-202ENST00000535789 LRRC10Q5BKY1 277 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 GPR157Q5UAW9 335 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 METTL11BQ5VVY1 283 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 LIPKQ5VXJ0 399 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 RPL22L1Q6P5R6 122 aaKnown RBP13.46□□□□□ -0.25
ATL3-202ENST00000535789 GPR141Q7Z602 305 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 ZNF573Q86YE8 665 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 H1FXQ92522 213 aaKnown RBP13.46□□□□□ -0.25
ATL3-202ENST00000535789 UFD1Q92890 307 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 TNFRSF14Q92956 283 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 PGLYRP3Q96LB9 341 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 CNTD2Q9H8S5 307 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 PLEKHA1Q9HB21 404 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 SIRT7Q9NRC8 400 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 NDUFB11Q9NX14 153 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 ONECUT1Q9UBC0 465 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 KPTNQ9Y664 436 aa13.46□□□□□ -0.25
ATL3-202ENST00000535789 IGHV1-69DA0A0B4J2H0 117 aa13.45□□□□□ -0.26
ATL3-202ENST00000535789 PNMA8CA0A1B0GUJ8 204 aa13.45□□□□□ -0.26
ATL3-202ENST00000535789 FAM230AA0A1W2PPH8 454 aa13.45□□□□□ -0.26
ATL3-202ENST00000535789 RFPL4AA6NLU0 287 aa13.45□□□□□ -0.26
ATL3-202ENST00000535789 RFPL4AL1F8VTS6 287 aa13.45□□□□□ -0.26
ATL3-202ENST00000535789 RNASEK-C17orf49H0YIS7 233 aa13.45□□□□□ -0.26
ATL3-202ENST00000535789 CCRL2O00421 344 aa13.45□□□□□ -0.26
ATL3-202ENST00000535789 IGHV1-69P01742 117 aa13.45□□□□□ -0.26
ATL3-202ENST00000535789 ISG15P05161 165 aa13.45□□□□□ -0.26
ATL3-202ENST00000535789 CD1AP06126 327 aa13.45□□□□□ -0.26
ATL3-202ENST00000535789 RNASE1P07998 156 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms