RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TRMT5Q32P41 509 aaKnown RBP2.38□□□□□ -2.03
SNHG1-202ENST00000535689 PLPPR5Q32ZL2 321 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 LINC01620Q4KN68 170 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF57Q68EA5 555 aaPredicted RBP2.38□□□□□ -2.03
SNHG1-202ENST00000535689 FAM71F2Q6NXP2 309 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 C3orf33Q6P1S2 294 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 LRRN1Q6UXK5 716 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 TMPPEQ6ZT21 453 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 PRSS48Q7RTY5 328 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 TRPM8Q7Z2W7 1104 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 MARCH3Q86UD3 253 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 FAM9CQ8IZT9 166 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 BBS1Q8NFJ9 593 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 OR52E2Q8NGJ4 325 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 OR5M1Q8NGP8 315 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 ADAMTS16Q8TE57 1224 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 ABHD3Q8WU67 409 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 DCAKDQ8WVC6 231 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 GTSF1Q8WW33 167 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 LRRC39Q96DD0 335 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 PLEKHA8Q96JA3 519 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 MS4A14Q96JA4 679 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 RNF145Q96MT1 663 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 HIST1H4GQ99525 98 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 CHP1Q99653 195 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 RBBP8Q99708 897 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 C1QTNF6Q9BXI9 259 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 YTHDF1Q9BYJ9 559 aaKnown RBP2.38□□□□□ -2.03
SNHG1-202ENST00000535689 SLC19A3Q9BZV2 496 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 NANOGQ9H9S0 305 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 NMRAL1Q9HBL8 299 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 MEPEQ9NQ76 525 aaPredicted RBP2.38□□□□□ -2.03
SNHG1-202ENST00000535689 GNG12Q9UBI6 72 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 CES1P1Q9UKY3 287 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 TMCO1Q9UM00 188 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 TRAPPC4Q9Y296 219 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 GSTK1Q9Y2Q3 226 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 ACOT9Q9Y305 439 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 CAB39Q9Y376 341 aaPredicted RBP2.38□□□□□ -2.03
SNHG1-202ENST00000535689 HDGFL3Q9Y3E1 203 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 MAB21L2Q9Y586 359 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 DSPPQ9NZW4 1301 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 ARPC4-TTLL3A0A0A6YYG9 625 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 IGHV1-69-2A0A0G2JMI3 117 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 CTAGE15A4D2H0 777 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 NCF1BA6NI72 391 aaPredicted RBP2.37□□□□□ -2.03
SNHG1-202ENST00000535689 TRIM64CA6NLI5 447 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 NCF1CA8MVU1 366 aaPredicted RBP2.37□□□□□ -2.03
SNHG1-202ENST00000535689 C9JVG2 144 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 ATP6V1G2-DDX39BF2Z307 99 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 H0Y9J4 135 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 SDHDO14521 159 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 TAPBPO15533 448 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 MGRN1O60291 552 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 GPX5O75715 221 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 UTS2O95399 124 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 MBD3O95983 291 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 IGLV1-47P01700 117 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 HSPB1P04792 205 aaKnown RBP2.37□□□□□ -2.03
SNHG1-202ENST00000535689 IFNW1P05000 195 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 PRPS2P11908 318 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 RPA2P15927 270 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 CBR1P16152 277 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 IMPDH1P20839 514 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 UQCRC2P22695 453 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 PTBP1P26599 531 aaKnown RBP eCLIP2.37□□□□□ -2.033e-55■■□□□ 13.5
SNHG1-202ENST00000535689 TGFBR2P37173 567 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 MAGEA6P43360 314 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 PPT1P50897 306 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 CCNG1P51959 295 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 CDKN2DP55273 166 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 SLC35A1P78382 337 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 SPIBQ01892 262 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 LRRC74AQ0VAA2 488 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 STX5Q13190 355 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 LAGE3Q14657 143 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 TSNQ15631 228 aaKnown RBP2.37□□□□□ -2.03
SNHG1-202ENST00000535689 AANATQ16613 207 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 GPR157Q5UAW9 335 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 UFSP1Q6NVU6 142 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 ERASQ7Z444 233 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 CTAGE6Q86UF2 777 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 SKA3Q8IX90 412 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 PDIK1LQ8N165 341 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 SPICQ8N5J4 248 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 CDRT4Q8N9R6 151 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 WDR31Q8NA23 367 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 GPR151Q8TDV0 419 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 DOK4Q8TEW6 326 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 C22orf15Q8WYQ4 148 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 C11orf40Q8WZ69 217 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 ST8SIA1Q92185 356 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 CDKL2Q92772 493 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 MARC2Q969Z3 335 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 DDIT4LQ96D03 193 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 CCT7Q99832 543 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 GAL3ST1Q99999 423 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 EBF4Q9BQW3 602 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 SRXN1Q9BYN0 137 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms