RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 GEMIN2O14893 280 aaKnown RBP11.68□□□□□ -0.54
HDAC4-214ENST00000535493 TIAF1O95411 115 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 CXCL1P09341 107 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 SPINK2P20155 84 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 PAX6P26367 422 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 CSNK1EP49674 416 aaKnown RBP11.68□□□□□ -0.54
HDAC4-214ENST00000535493 TMEM187Q14656 261 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 SHHQ15465 462 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 SLC25A47Q6Q0C1 308 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 SPNS3Q6ZMD2 512 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 HPSE2Q8WWQ2 592 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 TOLLIPQ9H0E2 274 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 SLC2A9Q9NRM0 540 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 NSG2Q9Y328 171 aa11.68□□□□□ -0.54
HDAC4-214ENST00000535493 BORCS7-ASMTA0A0B4J1R7 106 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 A0A1B0GX78 115 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 LILRA5A6NI73 299 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 CST7O76096 145 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 KLK3P07288 261 aaPredicted RBP11.67□□□□□ -0.54
HDAC4-214ENST00000535493 CTSDP07339 412 aaPredicted RBP11.67□□□□□ -0.54
HDAC4-214ENST00000535493 P2RY1P47900 373 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 RUNX1Q01196 453 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 SLC22A25Q6T423 547 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 SUMF2Q8NBJ7 301 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 ZNF385AQ96PM9 386 aaKnown RBP11.67□□□□□ -0.54
HDAC4-214ENST00000535493 GPR27Q9NS67 375 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 KCNIP3Q9Y2W7 256 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 LIPGQ9Y5X9 500 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 POMT1Q9Y6A1 747 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 IGKV1-27A0A075B6S5 117 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 NSG1A0A0A6YYJ2 146 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 SHISA7A6NL88 538 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 HAAOP46952 286 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 ZNF674Q2M3X9 581 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 C4orf17Q53FE4 359 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 HIST2H3AQ71DI3 136 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 OR2G3Q8NGZ4 309 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 UCN2Q96RP3 112 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 NELFAQ9H3P2 528 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 MOB1AQ9H8S9 216 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 PLEK2Q9NYT0 353 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 HDGFL3Q9Y3E1 203 aa11.67□□□□□ -0.54
HDAC4-214ENST00000535493 TGIF2-C20orf24A0A0A6YYL0 155 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 SEC11BP0C7V7 166 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 CD38P28907 300 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 RAB2AP61019 212 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 RSU1Q15404 277 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 ZNF383Q8NA42 475 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 TP53RKQ96S44 253 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 NAA60Q9H7X0 242 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 AKIRIN1Q9H9L7 192 aaPredicted RBP11.66□□□□□ -0.54
HDAC4-214ENST00000535493 PLEKHA2Q9HB19 425 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 DOK5Q9P104 306 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 IGHV1OR21-1A0A087WYE8 117 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 DHRS3O75911 302 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 PRF1P14222 555 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 MDKP21741 143 aaPredicted RBP11.66□□□□□ -0.54
HDAC4-214ENST00000535493 TAGLN2P37802 199 aaKnown RBP11.66□□□□□ -0.54
HDAC4-214ENST00000535493 RGS19P49795 217 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 ZNF84P51523 738 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 ERVFRD-1P60508 538 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 TLE1Q04724 770 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 HMGN3Q15651 99 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 NSUN5P2Q63ZY6 315 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 HEPN1Q6WQI6 88 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 HAS2Q92819 552 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 NTNG2Q96CW9 530 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 RAB39BQ96DA2 213 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 GINS3Q9BRX5 216 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 TMPRSS5Q9H3S3 457 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 H3BQ15 152 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 HEXBP07686 556 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 CCL1P22362 96 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 PLA2G5P39877 138 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 HTR5AP47898 357 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 CCR5P51681 352 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 OR10D4PQ8NGN7 298 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 Q8WTZ3 238 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 TMEM171Q8WVE6 324 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 SLC39A7Q92504 469 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 Q96M66 194 aa11.66□□□□□ -0.54
HDAC4-214ENST00000535493 MTIF3Q9H2K0 278 aaKnown RBP11.66□□□□□ -0.54
HDAC4-214ENST00000535493 ARHGAP21Q5T5U3 1957 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 A0A1W2PNV4 684 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 NKX2-6A6NCS4 301 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 GPR137BO60478 399 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 ATP6V0CP27449 155 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 GUCA1AP43080 201 aaPredicted RBP11.65□□□□□ -0.54
HDAC4-214ENST00000535493 RND3P61587 244 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 ESPL1Q14674 2120 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 SURF2Q15527 256 aaPredicted RBP11.65□□□□□ -0.54
HDAC4-214ENST00000535493 ZNF574Q6ZN55 896 aaPredicted RBP11.65□□□□□ -0.54
HDAC4-214ENST00000535493 Q6ZPA2 131 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 ANKRD37Q7Z713 158 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 CYB561D1Q8N8Q1 229 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 ARV1Q9H2C2 271 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 TUBA4BQ9H853 241 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 LMAN1LQ9HAT1 526 aa11.65□□□□□ -0.54
HDAC4-214ENST00000535493 HS3ST3B1Q9Y662 390 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms