RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 C1QL2Q7Z5L3 287 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 PDZD9Q8IXQ8 264 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 KLHL36Q8N4N3 616 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 SPICQ8N5J4 248 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 NANOGP1Q8N7R0 232 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 CYB561A3Q8NBI2 242 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 SEMA6DQ8NFY4 1073 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 OR8G5Q8NG78 346 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 OR11H7Q8NGC8 314 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 OR11H4Q8NGC9 324 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 OR13G1Q8NGZ3 307 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 NANPQ8TBE9 248 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 ZNF418Q8TF45 676 aaPredicted RBP7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 KCTD12Q96CX2 325 aaKnown RBP7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 MEGF10Q96KG7 1140 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 ZNF582Q96NG8 517 aaPredicted RBP7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 ATF6BQ99941 703 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 HCAR1Q9BXC0 346 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 PLA2G12AQ9BZM1 189 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 SLC25A32Q9H2D1 315 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 C7orf69Q9H7B7 122 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 MRPL22Q9NWU5 206 aaKnown RBP7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 EXTL2Q9UBQ6 330 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 MXRA5Q9NR99 2828 aa7.19□□□□□ -1.26
SFSWAP-202ENST00000535202 TVP23AA6NH52 213 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 NUDT19A8MXV4 375 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 IQCF6A8MYZ5 107 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 F5H5P2 479 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 TMEM178BH3BS89 294 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 BHLHE40O14503 412 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 MLNRO43193 412 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 CDRT1O95170 752 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 ZNF205O95201 554 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 CYB5R3P00387 301 aaPredicted RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 GASTP01350 101 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 LCATP04180 440 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 FBP1P09467 338 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 GIPP09681 153 aaPredicted RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 SELEP16581 610 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 GATA3P23771 443 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 ZFP36P26651 326 aaKnown RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 MDH2P40926 338 aaKnown RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 RPS27P42677 84 aaKnown RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 SLC6A9P48067 706 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 SRP9P49458 86 aaKnown RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 RAP2BP61225 183 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 SEC61A1P61619 476 aaKnown RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 ECH1Q13011 328 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 MALLQ13021 153 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 TPBGQ13641 420 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 GPR176Q14439 515 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 KRTAP27-1Q3LI81 207 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 CDNFQ49AH0 187 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 TMEM155Q4W5P6 130 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 CD200R1LQ6Q8B3 271 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 LYPD4Q6UWN0 246 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 BAIAP2L2Q6UXY1 529 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 NAA40Q86UY6 237 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 MOGAT3Q86VF5 341 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 LRRC28Q86X40 367 aaPredicted RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 LINC00471Q8N535 108 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 C12orf45Q8N5I9 185 aaPredicted RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 AQP11Q8NBQ7 271 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 OR51L1Q8NGJ5 315 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 OR4C15Q8NGM1 316 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 SFT2D1Q8WV19 159 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 ST8SIA2Q92186 375 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 SLC6A7Q99884 636 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 C1QTNF5Q9BXJ0 243 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 NKX6-2Q9C056 277 aaPredicted RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 PATZ1Q9HBE1 687 aaKnown RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 GCM1Q9NP62 436 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 EXOSC4Q9NPD3 245 aaKnown RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 PNRC2Q9NPJ4 139 aaKnown RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 TMEM100Q9NV29 134 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 TXNL4BQ9NX01 149 aaKnown RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 AASSQ9UDR5 926 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 ZNF222Q9UK12 451 aa7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 RPL36Q9Y3U8 105 aaKnown RBP7.18□□□□□ -1.26
SFSWAP-202ENST00000535202 WNK2Q9Y3S1 2297 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 A0A1B0GWJ7 208 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 TRDV1A0A1B0GX56 115 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 ZNF729A6NN14 1252 aaPredicted RBP7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 ZAR1LA6NP61 321 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 CEACAM18A8MTB9 384 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 IFNL4K9M1U5 179 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 M0R135 149 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 CLN5O75503 358 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 RGS11O94810 467 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 SOX14O95416 240 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 CFDP00746 253 aaPredicted RBP7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 HLA-DPB1P04440 258 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 SPARCP09486 303 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 POU1F1P28069 291 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 EPHA2P29317 976 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 HMGA2P52926 109 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 HILS1P60008 231 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 RPS7P62081 194 aaKnown RBP7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 ACTG1P63261 375 aa7.17□□□□□ -1.26
SFSWAP-202ENST00000535202 GK2Q14410 553 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms