RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 CROCCP3Q8IVE0 287 aa11.79□□□□□ -0.52
CMTM1-217ENST00000533666 CLDND2Q8NHS1 167 aa11.79□□□□□ -0.52
CMTM1-217ENST00000533666 MRPS24Q96EL2 167 aaKnown RBP11.79□□□□□ -0.52
CMTM1-217ENST00000533666 ZNF488Q96MN9 340 aa11.79□□□□□ -0.52
CMTM1-217ENST00000533666 PATZ1Q9HBE1 687 aaKnown RBP11.79□□□□□ -0.52
CMTM1-217ENST00000533666 HMG20AQ9NP66 347 aa11.79□□□□□ -0.52
CMTM1-217ENST00000533666 AK6Q9Y3D8 172 aaKnown RBP11.79□□□□□ -0.52
CMTM1-217ENST00000533666 VPS13CQ709C8 3753 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 CYSRT1A8MQ03 144 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.78□□□□□ -0.52
CMTM1-217ENST00000533666 SLC17A2O00624 439 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 SH2D1BO14796 132 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 TMPRSS2O15393 492 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 ADAM20O43506 726 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 TMEM127O75204 238 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 HTR3BO95264 441 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 IGHV2-5P01817 119 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 GYPAP02724 150 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 GTF2F2P13984 249 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 FOSL1P15407 271 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 GABRA2P47869 451 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 NPBWR2P48146 333 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 FGF12P61328 243 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 IL13RA1P78552 427 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 DGUOKQ16854 277 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 SLC22A6Q4U2R8 563 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 STUMQ69YW2 141 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 ANKRD13BQ86YJ7 626 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 C19orf18Q8NEA5 215 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 PPP1R35Q8TAP8 253 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 C18orf12Q96KH6 178 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 CENPOQ9BU64 300 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 SEBOXQ9HB31 216 aaPredicted RBP11.78□□□□□ -0.52
CMTM1-217ENST00000533666 RBFOX1Q9NWB1 397 aaKnown RBP11.78□□□□□ -0.52
CMTM1-217ENST00000533666 KAAG1Q9UBP8 84 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 OR14J1Q9UGF5 321 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 CELSR1Q9NYQ6 3014 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 TLN2Q9Y4G6 2542 aa11.78□□□□□ -0.52
CMTM1-217ENST00000533666 ABCA1O95477 2261 aa11.77□□□□□ -0.52
CMTM1-217ENST00000533666 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.77□□□□□ -0.52
CMTM1-217ENST00000533666 MALRD1Q5VYJ5 2156 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 IGKV1-12A0A0C4DH73 117 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 RFPL4AA6NLU0 287 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 NOTOA8MTQ0 251 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 RFPL4AL1F8VTS6 287 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 SMAD7O15105 426 aaKnown RBP11.77□□□□□ -0.53
CMTM1-217ENST00000533666 SLC22A1O15245 554 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 GPR37O15354 613 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 NDUFB3O43676 98 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 FOXH1O75593 365 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 CDRT1O95170 752 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 BPNT1O95861 308 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 IGKV1D-12P01611 117 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 CHRM2P08172 466 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 CD37P11049 281 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 PSG2P11465 335 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 CD99P14209 185 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 ARSBP15848 533 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 PRDX2P32119 198 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 SDC2P34741 201 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 PITPNBP48739 271 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 LMO4P61968 165 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 ZNF146Q15072 292 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 FAM189A2Q15884 450 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 C11orf91Q3C1V1 193 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 LRRC10Q5BKY1 277 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 GPR107Q5VW38 600 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 LINC00596Q86U02 117 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 LYPD6Q86Y78 171 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 OSR2Q8N2R0 312 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 ZNF561Q8N587 486 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 OR5T2Q8NGG2 359 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 OR4D6Q8NGJ1 314 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 ANGPTL6Q8NI99 470 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 KCNG3Q8TAE7 436 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 COX4I2Q96KJ9 171 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 BCL7BQ9BQE9 202 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 CLN8Q9UBY8 286 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 STEAP1Q9UHE8 339 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 CSPG4Q6UVK1 2322 aa11.77□□□□□ -0.53
CMTM1-217ENST00000533666 WNK2Q9Y3S1 2297 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 IFITM5A6NNB3 132 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 B4DSR2 109 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 AIPO00170 330 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 CRTAPO75718 401 aaPredicted RBP11.76□□□□□ -0.53
CMTM1-217ENST00000533666 IL1AP01583 271 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 SFTPBP07988 381 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 WNT2P09544 360 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 SERPINA2P20848 420 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 LSM3P62310 102 aaKnown RBP11.76□□□□□ -0.53
CMTM1-217ENST00000533666 GNB2P62879 340 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 HNRNPA0Q13151 305 aaKnown RBP11.76□□□□□ -0.53
CMTM1-217ENST00000533666 IL13RA2Q14627 380 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 TMEM249Q2WGJ8 235 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 NHLRC3Q5JS37 347 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 CD276Q5ZPR3 534 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 CYB5R2Q6BCY4 276 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 CRIP3Q6Q6R5 217 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 ZNF788Q6ZQV5 615 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 RNF144BQ7Z419 303 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms