RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TRBV5-5A0A0J9YX44 114 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 SFTPBP07988 381 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 SOX2P48431 317 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 POU3F4P49335 361 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 CEBPDP49716 269 aaPredicted RBP16.87■□□□□ 0.29
CCS-208ENST00000533244 RPS11P62280 158 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCS-208ENST00000533244 KIR3DL3Q8N743 410 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 ZNF418Q8TF45 676 aaPredicted RBP16.87■□□□□ 0.29
CCS-208ENST00000533244 SPACA5Q96QH8 159 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 SLC6A7Q99884 636 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 SEBOXQ9HB31 216 aaPredicted RBP16.87■□□□□ 0.29
CCS-208ENST00000533244 SCN3BQ9NY72 215 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 KPTNQ9Y664 436 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 TRAV40A0A0B4J280 105 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 IGKV1-12A0A0C4DH73 117 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 IGKV1D-12P01611 117 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 CD1AP06126 327 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 CD2P06729 351 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 OCM2P0CE71 109 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 OCMP0CE72 109 aaPredicted RBP16.86■□□□□ 0.29
CCS-208ENST00000533244 FPR2P25090 351 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 NPBWR2P48146 333 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 SRSF2Q01130 221 aaKnown RBP16.86■□□□□ 0.29
CCS-208ENST00000533244 ZFP41Q8N8Y5 198 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 TMEM185AQ8NFB2 350 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 OR13C5Q8NGS8 318 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 SGCDQ92629 289 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 MYDGFQ969H8 173 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 TMEM106AQ96A25 262 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 RFT1Q96AA3 541 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 DUSP21Q9H596 190 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 ERGIC3Q9Y282 383 aa16.86■□□□□ 0.29
CCS-208ENST00000533244 PTGES3LE9PB15 166 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 SPRY1O43609 319 aaPredicted RBP16.85■□□□□ 0.29
CCS-208ENST00000533244 TOX4O94842 621 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 CYB5AP00167 134 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 NDUFB7P17568 137 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 HILS1P60008 231 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 ZP1P60852 638 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 ARF6P62330 175 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 BDH1Q02338 343 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 ACSM1Q08AH1 577 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 IRF3Q14653 427 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 KISS1Q15726 138 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 KRTAP24-1Q3LI83 254 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 YIF1BQ5BJH7 314 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 METTL11BQ5VVY1 283 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 SAXO1Q8IYX7 474 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 BPIFB2Q8N4F0 458 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 OR51A2Q8NGJ7 313 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 C22orf15Q8WYQ4 148 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 H1FXQ92522 213 aaKnown RBP16.85■□□□□ 0.29
CCS-208ENST00000533244 EMG1Q92979 244 aaKnown RBP16.85■□□□□ 0.29
CCS-208ENST00000533244 PCGF1Q9BSM1 259 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 SUCNR1Q9BXA5 334 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 FAM234AQ9H0X4 552 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 ELL3Q9HB65 397 aaPredicted RBP16.85■□□□□ 0.29
CCS-208ENST00000533244 RBFOX1Q9NWB1 397 aaKnown RBP16.85■□□□□ 0.29
CCS-208ENST00000533244 TAS2R4Q9NYW5 299 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 OR14J1Q9UGF5 321 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 LSM2Q9Y333 95 aaKnown RBP16.85■□□□□ 0.29
CCS-208ENST00000533244 PCDHGB5Q9Y5G0 923 aa16.85■□□□□ 0.29
CCS-208ENST00000533244 TRBV23-1A0A0A0MS06 115 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 KDM4BO94953 1096 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 VENTXO95231 258 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 RAB3AP20336 220 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 BCL3P20749 454 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 VHLP40337 213 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 ZSCAN4Q8NAM6 433 aaPredicted RBP16.84■□□□□ 0.29
CCS-208ENST00000533244 TMEM158Q8WZ71 300 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 MND1Q9BWT6 205 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 RHOFQ9HBH0 211 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 IL36RNQ9UBH0 155 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 RAB26Q9ULW5 256 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 TPRKBQ9Y3C4 175 aa16.84■□□□□ 0.29
CCS-208ENST00000533244 DNHD1Q96M86 4753 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 IGHV3OR16-10A0A075B7F0 116 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 ANGPTL7O43827 346 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 ZNF737O75373 536 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 INMTO95050 263 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 TK1P04183 234 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 CHRM2P08172 466 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 HCKP08631 526 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 BPIFB3P59826 476 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 ZNF146Q15072 292 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 PDCD1Q15116 288 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 Q499Y3 187 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 BCL6BQ8N143 479 aaPredicted RBP16.83■□□□□ 0.28
CCS-208ENST00000533244 FAM58AQ8N1B3 248 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 OR5D18Q8NGL1 313 aa16.83■□□□□ 0.28
CCS-208ENST00000533244 CENPVL3A0A0U1RRI6 287 aa16.82■□□□□ 0.28
CCS-208ENST00000533244 RNF212BA8MTL3 300 aa16.82■□□□□ 0.28
CCS-208ENST00000533244 K7N7A8 449 aa16.82■□□□□ 0.28
CCS-208ENST00000533244 GPX5O75715 221 aa16.82■□□□□ 0.28
CCS-208ENST00000533244 ALDOBP05062 364 aa16.82■□□□□ 0.28
CCS-208ENST00000533244 IGFBP3P17936 291 aaPredicted RBP16.82■□□□□ 0.28
CCS-208ENST00000533244 CELP19835 753 aa16.82■□□□□ 0.28
CCS-208ENST00000533244 CRHBPP24387 322 aa16.82■□□□□ 0.28
CCS-208ENST00000533244 COL10A1Q03692 680 aa16.82■□□□□ 0.28
CCS-208ENST00000533244 GPR157Q5UAW9 335 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms