RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 DMRTC2Q8IXT2 367 aaPredicted RBP15.77■□□□□ 0.12
SMPD1-208ENST00000533123 NUP37Q8NFH4 326 aa15.77■□□□□ 0.12
SMPD1-208ENST00000533123 OR4C16Q8NGL9 310 aa15.77■□□□□ 0.12
SMPD1-208ENST00000533123 PIK3IP1Q96FE7 263 aa15.77■□□□□ 0.12
SMPD1-208ENST00000533123 HS3ST6Q96QI5 342 aa15.77■□□□□ 0.12
SMPD1-208ENST00000533123 TRAF4Q9BUZ4 470 aaPredicted RBP15.77■□□□□ 0.12
SMPD1-208ENST00000533123 FGF23Q9GZV9 251 aaPredicted RBP15.77■□□□□ 0.12
SMPD1-208ENST00000533123 TUBG2Q9NRH3 451 aa15.77■□□□□ 0.12
SMPD1-208ENST00000533123 DUSP13Q9UII6 198 aa15.77■□□□□ 0.12
SMPD1-208ENST00000533123 NUBP2Q9Y5Y2 271 aa15.77■□□□□ 0.12
SMPD1-208ENST00000533123 SHISA9B4DS77 424 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 J3QKU1 62 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 AKR7A2O43488 359 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 PLAUP00749 431 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 PRDX4Q13162 271 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 ZBTB37Q5TC79 503 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 MBNL2Q5VZF2 373 aaKnown RBP15.76■□□□□ 0.11
SMPD1-208ENST00000533123 LAMTOR1Q6IAA8 161 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 OR51T1Q8NGJ9 327 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 SCPEP1Q9HB40 452 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 NKIRAS2Q9NYR9 191 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 SLC7A11Q9UPY5 501 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 KCNK7Q9Y2U2 307 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 LRBAP50851 2863 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 NAP1L6A6NFF2 107 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 SULT1C2O00338 296 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 CRYZL1O95825 349 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 CD3DP04234 171 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 FUT6P51993 359 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 SIGIRRQ6IA17 410 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 TRAPPC6BQ86SZ2 158 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 CSNK2A3Q8NEV1 391 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 NEUROG1Q92886 237 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 RAB3CQ96E17 227 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 CITED4Q96RK1 184 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 FLVCR2Q9UPI3 526 aa15.76■□□□□ 0.11
SMPD1-208ENST00000533123 DCHS2Q6V1P9 2916 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 IGKV1-12A0A0C4DH73 117 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 SCGNO76038 276 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 IGKV1D-12P01611 117 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 CHRM2P08172 466 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 TMEM50BP56557 158 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 ACTBP60709 375 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 ACTG1P63261 375 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 SMUG1Q53HV7 270 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 CALHM1Q8IU99 346 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 HPSE2Q8WWQ2 592 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 ARHGAP5-AS1Q96IT6 56 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 NUDT16L1Q9BRJ7 211 aaKnown RBP15.75■□□□□ 0.11
SMPD1-208ENST00000533123 URM1Q9BTM9 101 aaKnown RBP15.75■□□□□ 0.11
SMPD1-208ENST00000533123 C20orf85Q9H1P6 137 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 ING3Q9NXR8 418 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 TAS2R8Q9NYW2 309 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 COPZ2Q9P299 210 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 PURGQ9UJV8 347 aaKnown RBP15.75■□□□□ 0.11
SMPD1-208ENST00000533123 RNF115Q9Y4L5 304 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 HRNRQ86YZ3 2850 aaPredicted RBP15.75■□□□□ 0.11
SMPD1-208ENST00000533123 ZNF250P15622 560 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 OR3A3P47888 321 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 RRAS2P62070 204 aaPredicted RBP15.75■□□□□ 0.11
SMPD1-208ENST00000533123 RPS23P62266 143 aaKnown RBP15.75■□□□□ 0.11
SMPD1-208ENST00000533123 SNRPD2P62316 118 aaKnown RBP15.75■□□□□ 0.11
SMPD1-208ENST00000533123 BTN2A1Q7KYR7 527 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 CDH24Q86UP0 819 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 FTMTQ8N4E7 242 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 GVQW1Q8N7I0 195 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 OR4S1Q8NGB4 309 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 CPNE2Q96FN4 548 aaPredicted RBP15.75■□□□□ 0.11
SMPD1-208ENST00000533123 SYT3Q9BQG1 590 aa15.75■□□□□ 0.11
SMPD1-208ENST00000533123 ANKRD30BLA7E2S9 258 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 IQCF6A8MYZ5 107 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 PRSS44E7EML9 344 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 SMLR1H3BR10 107 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 TIMM8AO60220 97 aaPredicted RBP15.74■□□□□ 0.11
SMPD1-208ENST00000533123 SSX5O60225 188 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 HTR3BO95264 441 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 MELTFP08582 738 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 HIST1H1DP16402 221 aaKnown RBP15.74■□□□□ 0.11
SMPD1-208ENST00000533123 CA6P23280 308 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 LOXP28300 417 aaPredicted RBP15.74■□□□□ 0.11
SMPD1-208ENST00000533123 ATP1B3P54709 279 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 RSU1Q15404 277 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 FAM89BQ8N5H3 189 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 OR56B1Q8NGI3 324 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 OR56B4Q8NH76 319 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 TECTBQ96PL2 329 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 METTL9Q9H1A3 318 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 BEX1Q9HBH7 125 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 KLF2Q9Y5W3 355 aaPredicted RBP15.74■□□□□ 0.11
SMPD1-208ENST00000533123 M0QYG6 137 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 TPD52L2O43399 206 aaKnown RBP15.74■□□□□ 0.11
SMPD1-208ENST00000533123 CST4P01036 141 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 SELEP16581 610 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 KITLGP21583 273 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 GPM6AP51674 278 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 BTG1P62324 171 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 SSBP1Q04837 148 aaKnown RBP15.74■□□□□ 0.11
SMPD1-208ENST00000533123 PDZK1IP1Q13113 114 aa15.74■□□□□ 0.11
SMPD1-208ENST00000533123 MEX3BQ6ZN04 569 aaKnown RBP15.74■□□□□ 0.11
SMPD1-208ENST00000533123 ZNF767PQ75MW2 155 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms