RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 COX4I2Q96KJ9 171 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 UQCC2Q9BRT2 126 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 OR51E2Q9H255 320 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 ZNF665Q9H7R5 613 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 RHOFQ9HBH0 211 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 HES4Q9HCC6 221 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 PCDHB16Q9NRJ7 776 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 TRAV1-2A0A0B4J238 106 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR2AT4A6NND4 320 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 PDCD5O14737 125 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 TNFRSF13BO14836 293 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 TMPRSS2O15393 492 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 ADAM20O43506 726 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 KDM4BO94953 1096 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 KNG1P01042 644 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 IGHV2-5P01817 119 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 PSG2P11465 335 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 RPS2P15880 293 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 ZNF182P17025 639 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 ADRA2CP18825 462 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 BCL3P20749 454 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 GADD45AP24522 165 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 MYL9P24844 172 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 PRDX2P32119 198 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 RANBP1P43487 201 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 GABRA2P47869 451 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR3A4PP47883 348 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 NPBWR2P48146 333 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 GZMKP49863 264 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 BMXP51813 675 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 RSU1Q15404 277 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 ATPAF1Q5TC12 328 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 CYB5R2Q6BCY4 276 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 LYPD2Q6UXB3 125 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 ASCL4Q6XD76 172 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 SLC36A1Q7Z2H8 476 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 C1QL2Q7Z5L3 287 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 FAM58AQ8N1B3 248 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 BATF2Q8N1L9 274 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR8B3Q8NGG8 313 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 EMG1Q92979 244 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 NEIL1Q96FI4 390 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 MED30Q96HR3 178 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR8B2Q96RD0 313 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 CCL13Q99616 98 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 CHCHD6Q9BRQ6 235 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 NAA50Q9GZZ1 169 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 DNTTIP1Q9H147 329 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 METTL9Q9H1A3 318 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 MMP27Q9H306 513 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 CNTD2Q9H8S5 307 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 TXNL4BQ9NX01 149 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 CCDC59Q9P031 241 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 GLS2Q9UI32 602 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 AK6Q9Y3D8 172 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 DYSFO75923 2080 aa9.39□□□□□ -0.91
TRAPPC4-211ENST00000533012 IGKV1-12A0A0C4DH73 117 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 LOC100506127A0A0U1RQW1 187 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 NKX6-3A6NJ46 265 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 RFPL4AA6NLU0 287 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 B4DSR2 109 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 RFPL4AL1F8VTS6 287 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 F8VVB4 439 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 F8VWA3 439 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 ZNF780AO75290 641 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 CDRT1O95170 752 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 HTR3BO95264 441 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 IGKV1D-12P01611 117 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 CSTBP04080 98 aaKnown RBP9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 SFTPBP07988 381 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 IL2RGP31785 369 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 S100A5P33763 92 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 GPR176Q14439 515 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 ESCO2Q56NI9 601 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 STUMQ69YW2 141 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 AWAT2Q6E213 333 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 C16orf87Q6PH81 154 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 GLIPR1L1Q6UWM5 242 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 LINC01356Q8N9X3 169 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 ANGPTL6Q8NI99 470 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 TBC1D15Q8TC07 691 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 C1orf159Q96HA4 380 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 KCTD7Q96MP8 289 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 NKX3-1Q99801 234 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 DCSTAMPQ9H295 470 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 RBFOX1Q9NWB1 397 aaKnown RBP9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 KAAG1Q9UBP8 84 aa9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 MRPS28Q9Y2Q9 187 aaKnown RBP9.38□□□□□ -0.91
TRAPPC4-211ENST00000533012 MYO9AB2RTY4 2548 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 IGKV1D-17A0A075B6S4 117 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 F5H0A9 414 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 NDUFB3O43676 98 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 FOXH1O75593 365 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 CHRM2P08172 466 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 IGHV4-31P0DP07 118 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 CALCBP10092 127 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 CD37P11049 281 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 PRKACAP17612 351 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 AMY2BP19961 511 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 PITPNBP48739 271 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms