RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 CENPBD1B2RD01 187 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 LOC730098B7Z3J9 87 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 J3QKU1 62 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 DNALI1O14645 258 aaPredicted RBP1.8□□□□□ -2.12
CD44-233ENST00000531141 ERI3O43414 337 aaKnown RBP1.8□□□□□ -2.12
CD44-233ENST00000531141 OR7C2O60412 319 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 MEF2BQ02080 365 aaPredicted RBP1.8□□□□□ -2.12
CD44-233ENST00000531141 BAMBIQ13145 260 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 NAB1Q13506 487 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 TAF9Q16594 264 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 KLHL12Q53G59 568 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 BEX5Q5H9J7 111 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 RWDD4Q6NW29 188 aaKnown RBP1.8□□□□□ -2.12
CD44-233ENST00000531141 TMEM53Q6P2H8 277 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 OPN5Q6U736 354 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 WDR82Q6UXN9 313 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 ZNF680Q8NEM1 530 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 OR56A4Q8NGH8 313 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 PHOSPHO2Q8TCD6 241 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 JSRP1Q96MG2 331 aaPredicted RBP1.8□□□□□ -2.12
CD44-233ENST00000531141 C11orf70Q9BRQ4 267 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 UQCC2Q9BRT2 126 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 MARVELD1Q9BSK0 173 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 COA1Q9GZY4 146 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 MFSD1Q9H3U5 465 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 PIGUQ9H490 435 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 EXO5Q9H790 373 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 TDRD3Q9H7E2 651 aaKnown RBP1.8□□□□□ -2.12
CD44-233ENST00000531141 AUNIPQ9H7T9 357 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 PLEKHF2Q9H8W4 249 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 CAB39Q9Y376 341 aaPredicted RBP1.8□□□□□ -2.12
CD44-233ENST00000531141 IBTKQ9P2D0 1353 aaPredicted RBP1.8□□□□□ -2.12
CD44-233ENST00000531141 IGF2RP11717 2491 aa1.8□□□□□ -2.12
CD44-233ENST00000531141 SETD2Q9BYW2 2564 aaPredicted RBP1.8□□□□□ -2.12
CD44-233ENST00000531141 ZFHX3Q15911 3703 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 POLQO75417 2590 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 MANBAO00462 879 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 FCN3O75636 299 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 TGM6O95932 706 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 PRB1P04280 392 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 RPN2P04844 631 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 IFNW1P05000 195 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 ASGR1P07306 291 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 BMI1P35226 326 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 MYCNOSP40205 109 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 ERFP50548 548 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 BTN1A1Q13410 526 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 ITIH4Q14624 930 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 LRP11Q86VZ4 500 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 ZNF547Q8IVP9 402 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 DRAM1Q8N682 238 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 OR5AR1Q8NGP9 310 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 RAB1CQ92928 201 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 OR4K3Q96R72 315 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 ELOVL6Q9H5J4 265 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 MYEF2Q9P2K5 600 aaKnown RBP1.79□□□□□ -2.12
CD44-233ENST00000531141 COMMD3-BMI1R4GMX3 469 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 MROH7Q68CQ1 1323 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 DUOX1Q9NRD9 1551 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
CD44-233ENST00000531141 DNHD1Q96M86 4753 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 OTOFQ9HC10 1997 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 NUP98P52948 1817 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 DDX60Q8IY21 1712 aaKnown RBP1.78□□□□□ -2.12
CD44-233ENST00000531141 RFX7Q2KHR2 1363 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 ELP1O95163 1332 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 OR6C70A6NIJ9 312 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 PRAMEF26H0Y7S4 382 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 MFNGO00587 321 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 BCKDKO14874 412 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 IGKV1D-16P01601 117 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 GFAPP14136 432 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 PRKACBP22694 351 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 APLNRP35414 380 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 GGT2P36268 569 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 CCL23P55773 120 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 TAS2R43P59537 309 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 UBE2MP61081 183 aaKnown RBP1.78□□□□□ -2.12
CD44-233ENST00000531141 ILKQ13418 452 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 FAM53BQ14153 422 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 TFDP2Q14188 446 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 KRTAP21-3Q3LHN1 58 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 TMEM136Q6ZRR5 245 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 OTUD6AQ7L8S5 288 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 NT5DC3Q86UY8 548 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 OFCC1Q8IZS5 231 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 STK40Q8N2I9 435 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 C8orf31Q8N9H6 132 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 CCDC148Q8NFR7 591 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 OR52N1Q8NH53 320 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 OR51F2Q8NH61 342 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 GPR82Q96P67 336 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 DHX35Q9H5Z1 703 aaKnown RBP1.78□□□□□ -2.12
CD44-233ENST00000531141 TAS2R5Q9NYW4 299 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 IL37Q9NZH6 218 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 ZNF391Q9UJN7 358 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 UBIAD1Q9Y5Z9 338 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 AKAP13Q12802 2813 aa1.78□□□□□ -2.12
CD44-233ENST00000531141 MYO7AQ13402 2215 aa1.78□□□□□ -2.13
CD44-233ENST00000531141 CELSR3Q9NYQ7 3312 aa1.78□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms