RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 GABRB1P18505 474 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 PRKACBP22694 351 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 POU3F4P49335 361 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 RBP2P50120 134 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 CCR9P51686 369 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 ATP1B3P54709 279 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 NANOS3P60323 173 aaKnown RBP10.88□□□□□ -0.67
VPS28-211ENST00000530790 COL10A1Q03692 680 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 GALEQ14376 348 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 TAF9Q16594 264 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 PRR31Q5SQ13 230 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 OLFML2AQ68BL7 652 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 DHRS7BQ6IAN0 325 aaPredicted RBP10.88□□□□□ -0.67
VPS28-211ENST00000530790 LHFPL2Q6ZUX7 228 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 UTS2BQ765I0 119 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 OR13C3Q8NGS6 347 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 PELI1Q96FA3 418 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 ALG8Q9BVK2 526 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 ZNF696Q9H7X3 374 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 MTCH1Q9NZJ7 389 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 HHLA2Q9UM44 414 aa10.88□□□□□ -0.67
VPS28-211ENST00000530790 LOC100130705A0A1B0GUX0 176 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 CLPSL1A2RUU4 121 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 F8VVB4 439 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 F8VWA3 439 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 K7N7A8 449 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 FADS2O95864 444 aaKnown RBP10.87□□□□□ -0.67
VPS28-211ENST00000530790 PIPP12273 146 aaPredicted RBP10.87□□□□□ -0.67
VPS28-211ENST00000530790 CCL3L1P16619 93 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 AZGP1P25311 298 aaKnown RBP10.87□□□□□ -0.67
VPS28-211ENST00000530790 EDDM3BP56851 147 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 ERVFRD-1P60508 538 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 ALKBH1Q13686 389 aaKnown RBP10.87□□□□□ -0.67
VPS28-211ENST00000530790 ZNF273Q14593 569 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 MIDNQ504T8 468 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 TMEM200BQ69YZ2 307 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 HCP5Q6MZN7 132 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 GDPD3Q7L5L3 318 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 EGFL6Q8IUX8 553 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 MKXQ8IYA7 352 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 SYS1Q8N2H4 156 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 ZNF676Q8N7Q3 588 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 BEND2Q8NDZ0 799 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 OR5R1Q8NH85 324 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 STMN2Q93045 179 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 SPSB1Q96BD6 273 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 FGGYQ96C11 551 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 SLC29A1Q99808 456 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 HEXA-AS1Q9H8Q6 139 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 INPP5EQ9NRR6 644 aa10.87□□□□□ -0.67
VPS28-211ENST00000530790 IGKV1-9A0A0C4DH69 117 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 TRBV2A0A0J9YWF9 115 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 OR4C45A6NMZ5 311 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 BAG2O95816 211 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 HAND1O96004 215 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 IGHA1P01876 353 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 ATF1P18846 271 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 COX7A1P24310 79 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 MTCP1P56278 107 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 RAB40BQ12829 278 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 MRPL28Q13084 256 aaKnown RBP10.86□□□□□ -0.67
VPS28-211ENST00000530790 ZSCAN26Q16670 478 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 BRICD5Q6PL45 260 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 LHFPL3Q86UP9 236 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 OR8H2Q8N162 312 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 OR51A4Q8NGJ6 313 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 OR10AC1Q8NH08 325 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 RHOXF1Q8NHV9 184 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 OPALINQ96PE5 141 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 NEK6Q9HC98 313 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 AMBNQ9NP70 447 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 RBFOX1Q9NWB1 397 aaKnown RBP10.86□□□□□ -0.67
VPS28-211ENST00000530790 FAM118AQ9NWS6 357 aa10.86□□□□□ -0.67
VPS28-211ENST00000530790 RPL36Q9Y3U8 105 aaKnown RBP10.86□□□□□ -0.67
VPS28-211ENST00000530790 H3BUX3 64 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 ZNF737O75373 536 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 RPSAP08865 295 aaKnown RBP10.85□□□□□ -0.67
VPS28-211ENST00000530790 CCDC159P0C7I6 412 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 BCL3P20749 454 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 GABRR1P24046 479 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 BMXP51813 675 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 EDDM3AQ14507 147 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 ZNF782Q6ZMW2 699 aaPredicted RBP10.85□□□□□ -0.67
VPS28-211ENST00000530790 FAM58AQ8N1B3 248 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 ZNF555Q8NEP9 628 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 OR13C9Q8NGT0 318 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 RDH12Q96NR8 316 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 COMMD4Q9H0A8 199 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 ISG20L2Q9H9L3 353 aaKnown RBP10.85□□□□□ -0.67
VPS28-211ENST00000530790 ERVK13-1Q9NX77 482 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 SMPD3Q9NY59 655 aaPredicted RBP10.85□□□□□ -0.67
VPS28-211ENST00000530790 IL36RNQ9UBH0 155 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 GLS2Q9UI32 602 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 MYRFQ9Y2G1 1151 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 RNF114Q9Y508 228 aa10.85□□□□□ -0.67
VPS28-211ENST00000530790 TMEM212A6NML5 194 aa10.84□□□□□ -0.67
VPS28-211ENST00000530790 RBP4P02753 201 aa10.84□□□□□ -0.67
VPS28-211ENST00000530790 ZNF728P0DKX0 622 aa10.84□□□□□ -0.67
VPS28-211ENST00000530790 PRKACAP17612 351 aa10.84□□□□□ -0.67
VPS28-211ENST00000530790 TGFBR2P37173 567 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms