RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 FAM87AP0C7U9 286 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 MMP9P14780 707 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 CXCL2P19875 107 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 CEACAM6P40199 344 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 ACAA2P42765 397 aaKnown RBP6.8□□□□□ -1.32
CTNND1-223ENST00000529986 CDKN2AP42771 156 aaKnown RBP6.8□□□□□ -1.32
CTNND1-223ENST00000529986 ZNF273Q14593 569 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 ELOBQ15370 118 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 NEIL1Q96FI4 390 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-223ENST00000529986 ICAM5Q9UMF0 924 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 NUP205Q92621 2012 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 A0A0B4J2E0 115 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 TRBV5-4A0A0C4DH59 114 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 A0A1B0GX12 115 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 DHHO43323 396 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 CDC14BO60729 498 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 IGHV3-13P01766 116 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 IGHV3-7P01780 117 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 RPL7P18124 248 aaKnown RBP6.8□□□□□ -1.32
CTNND1-223ENST00000529986 THBS4P35443 961 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 MNX1P50219 401 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-223ENST00000529986 CCL11P51671 97 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 SPCS3P61009 180 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 IFITM2Q01629 132 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 UBE2V2Q15819 145 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 PWWP2BQ6NUJ5 590 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 TRAT1Q6PIZ9 186 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 TMPRSS11FQ6ZWK6 438 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 NUFIP2Q7Z417 695 aaKnown RBP6.8□□□□□ -1.32
CTNND1-223ENST00000529986 ADAD2Q8NCV1 583 aaKnown RBP6.8□□□□□ -1.32
CTNND1-223ENST00000529986 OR1L6Q8NGR2 347 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 BCL2L2Q92843 193 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-223ENST00000529986 VAMP5O95183 116 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 FUT6P51993 359 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 ADPRHP54922 357 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 SHHQ15465 462 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 MENTQ9BUN1 341 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 ZNF576Q9H609 170 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 SLC17A5Q9NRA2 495 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 H3BVH4 76 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 SIAH2O43255 324 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 FCGR3BO75015 233 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 CRYAAP02489 173 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 PGA3P0DJD8 388 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 BTNL3Q6UXE8 466 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-223ENST00000529986 MS4A3Q96HJ5 214 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 MMP25Q9NPA2 562 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 KNL1Q8NG31 2342 aa6.8□□□□□ -1.32
CTNND1-223ENST00000529986 A0A1B0GV90 55 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 CXorf65A6NEN9 183 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 GALP22466 123 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 IL13RA2Q14627 380 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 ZNF793Q6ZN11 406 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 TMEM251Q8N6I4 163 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 NOXO1Q8NFA2 376 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 HES4Q9HCC6 221 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 ZNF831Q5JPB2 1677 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 IGHV3-43A0A0B4J1X8 118 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 C5orf52A6NGY3 159 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 EPPINO95925 133 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 RBP4P02753 201 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 ANKRD34CP0C6C1 535 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 TMIGD3P0DMS9 266 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-223ENST00000529986 IGHV3-43DP0DP04 118 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 SELEP16581 610 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 CLDN15P56746 228 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 IL10RAQ13651 578 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 Q56UQ5 140 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 ZNF362Q5T0B9 420 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-223ENST00000529986 NSUN5P2Q63ZY6 315 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 DHRS13Q6UX07 377 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 OR4C3Q8NH37 302 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 ST8SIA1Q92185 356 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 TTC9Q92623 222 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 TSPAN32Q96QS1 320 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 RAB40CQ96S21 281 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 TECRQ9NZ01 308 aaKnown RBP6.79□□□□□ -1.32
CTNND1-223ENST00000529986 HRASP01112 189 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 GP1BAP07359 652 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 FBP1P09467 338 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 S100A4P26447 101 aaKnown RBP6.79□□□□□ -1.32
CTNND1-223ENST00000529986 IER3P46695 156 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 PSMB2P49721 201 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 MRPS21P82921 87 aaKnown RBP6.79□□□□□ -1.32
CTNND1-223ENST00000529986 TMEM215Q68D42 235 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 PUSL1Q8N0Z8 303 aaKnown RBP6.79□□□□□ -1.32
CTNND1-223ENST00000529986 DEFB123Q8N688 67 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 MRPL24Q96A35 216 aaKnown RBP6.79□□□□□ -1.32
CTNND1-223ENST00000529986 ABHD14AQ9BUJ0 271 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 TWSG1Q9GZX9 223 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 TMEM140Q9NV12 185 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 PRSS1P07477 247 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 CCR2P41597 374 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 HINT1P49773 126 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-223ENST00000529986 GNG10P50151 68 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 FZD2Q14332 565 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 CEACAM16Q2WEN9 425 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 HES3Q5TGS1 186 aa6.79□□□□□ -1.32
CTNND1-223ENST00000529986 OR4A47Q6IF82 309 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms