RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 NARS2Q96I59 477 aaKnown RBP2.77□□□□□ -1.97
C11orf88-204ENST00000529661 RDH12Q96NR8 316 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 HSD17B10Q99714 261 aaKnown RBP2.77□□□□□ -1.97
C11orf88-204ENST00000529661 TOLLIPQ9H0E2 274 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 OR52D1Q9H346 318 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 HRASLSQ9HDD0 168 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 RRAGDQ9NQL2 400 aaPredicted RBP2.77□□□□□ -1.97
C11orf88-204ENST00000529661 RGS18Q9NS28 235 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 BABAM2Q9NXR7 383 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 RAB23Q9ULC3 237 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 POLR3HQ9Y535 204 aaPredicted RBP2.77□□□□□ -1.97
C11orf88-204ENST00000529661 MTCH2Q9Y6C9 303 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 TMEM14AQ9Y6G1 99 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 AHDC1Q5TGY3 1603 aaPredicted RBP2.77□□□□□ -1.97
C11orf88-204ENST00000529661 SMIM26A0A096LP01 95 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 TRAV8-4A0A0B4J246 113 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 IGHV1OR15-9A0A0B4J2B8 117 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 IGHV1-69DA0A0B4J2H0 117 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 LRRN3E7EW58 273 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 UBDO15205 165 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 NSA2O95478 260 aaKnown RBP2.76□□□□□ -1.97
C11orf88-204ENST00000529661 P01737 135 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 APOEP02649 317 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 APCSP02743 223 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 C8orf88P0DMB2 117 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 ZNF7P17097 686 aaPredicted RBP2.76□□□□□ -1.97
C11orf88-204ENST00000529661 CD70P32970 193 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 TUFMP49411 452 aaKnown RBP2.76□□□□□ -1.97
C11orf88-204ENST00000529661 NDUFA8P51970 172 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 AP3S2P59780 193 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 KRTAP10-1P60331 282 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 RAB8AP61006 207 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 CEACAM21Q3KPI0 293 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 DNAL1Q4LDG9 190 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 LINC00483Q53H64 154 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 PDZD11Q5EBL8 140 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 FAM78AQ5JUQ0 283 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 MED27Q6P2C8 311 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 CALHM1Q8IU99 346 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 UBALD2Q8IYN6 164 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 GAPTQ8N292 157 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 OR2AE1Q8NHA4 323 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 NT5CQ8TCD5 201 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 PHOSPHO2Q8TCD6 241 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 ZMYND19Q96E35 227 aaPredicted RBP2.76□□□□□ -1.97
C11orf88-204ENST00000529661 TRIM45Q9H8W5 580 aaPredicted RBP2.76□□□□□ -1.97
C11orf88-204ENST00000529661 ABCB9Q9NP78 766 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 TAS2R9Q9NYW1 312 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 ATPIF1Q9UII2 106 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 VAX2Q9UIW0 290 aa2.76□□□□□ -1.97
C11orf88-204ENST00000529661 TRAV19A0A0A6YYK7 116 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 ISPDA4D126 451 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 OR2AT4A6NND4 320 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 ZNF705GA8MUZ8 300 aaPredicted RBP2.75□□□□□ -1.97
C11orf88-204ENST00000529661 KRBOX1C9JBD0 128 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 H0Y980 276 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 M0R036 132 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 RAD1O60671 282 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 ZNF324O75467 553 aaPredicted RBP2.75□□□□□ -1.97
C11orf88-204ENST00000529661 IFNA5P01569 189 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 HLA-DQA1P01909 254 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 IFNA6P05013 189 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 CISD3P0C7P0 127 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 NQO1P15559 274 aaKnown RBP2.75□□□□□ -1.97
C11orf88-204ENST00000529661 PVALBP20472 110 aaPredicted RBP2.75□□□□□ -1.97
C11orf88-204ENST00000529661 KIR3DL2P43630 455 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 MTPNP58546 118 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 VBP1P61758 197 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 CACNG7P62955 275 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 CRADDP78560 199 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 PTGES3Q15185 160 aaKnown RBP2.75□□□□□ -1.97
C11orf88-204ENST00000529661 CDNFQ49AH0 187 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 SMUG1Q53HV7 270 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 MPV17L2Q567V2 206 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 OGFRL1Q5TC84 451 aaPredicted RBP2.75□□□□□ -1.97
C11orf88-204ENST00000529661 STEAP4Q687X5 459 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 FAM173BQ6P4H8 233 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 TTC33Q6PID6 262 aaPredicted RBP2.75□□□□□ -1.97
C11orf88-204ENST00000529661 UBAC2Q8NBM4 344 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 OR4K5Q8NGD3 323 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 ACTL9Q8TC94 416 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 PTH2Q96A98 100 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 SMARCD1Q96GM5 515 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 OR51V1Q9H2C8 321 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 DHX35Q9H5Z1 703 aaKnown RBP2.75□□□□□ -1.97
C11orf88-204ENST00000529661 ZNF430Q9H8G1 570 aaPredicted RBP2.75□□□□□ -1.97
C11orf88-204ENST00000529661 FGFR1OP2Q9NVK5 253 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 DDIT4Q9NX09 232 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 ANXA10Q9UJ72 324 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 C3orf18Q9UK00 162 aa2.75□□□□□ -1.97
C11orf88-204ENST00000529661 YTHDF2Q9Y5A9 579 aaKnown RBP2.75□□□□□ -1.97
C11orf88-204ENST00000529661 COL4A4P53420 1690 aaPredicted RBP2.74□□□□□ -1.97
C11orf88-204ENST00000529661 IGKV2D-24A0A075B6R9 120 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 TMEM223A0PJW6 202 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 F5H768 121 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 M0QZ92 97 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 TAAR5O14804 337 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 TCAPO15273 167 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms